RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Csa_2G012730	Gene ID		Accession	-
Symbol		Alias	-	Full Name	ARM repeat superfamily protein
Status	Confidence	Length	10004 bases	Strand	Plus strand
Position	2 : 2258882 - 2268885	RNA binding domain	Exportin-5 , Xpo1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
KGN60841	Exportin-5	PF19273	8.8e-294	1
KGN60841	Xpo1	PF08389	6.6e-26	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	KGN60841	4212	1198aa	KGN60841

Gene Model

Click here to download Csa_2G012730's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Csa_2G012730's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Csa_2G012730

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Csa_2G012730

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression