RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Csa_1G086920	Gene ID		Accession	-
Symbol		Alias	-	Full Name	SUMO (small ubiquitin-related modifier) E3-ligase, Abiotic stress response, Stress adaptatio
Status	Confidence	Length	16094 bases	Strand	Minus strand
Position	1 : 8224921 - 8241014	RNA binding domain	SAP
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
KGN64749	SAP	PF02037	3.9e-08	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	KGN64749	3586	960aa	KGN64749

Gene Model

Click here to download Csa_1G086920's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Csa_1G086920's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Csa_1G086920

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Csa_1G086920

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression