Description

Ensembl ID Csa20g081280 Gene ID Accession -
Symbol Alias - Full Name Regulator of nonsense transcripts 1 homolog
Status Confidence Length 9439 bases Strand Plus strand
Position 20 : 29172268 - 29181706 RNA binding domain ResIII , UPF1_1B_dom , UPF1_Zn_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Csa20g081280 ResIII PF04851 9e-05 1
Csa20g081280 UPF1_1B_dom PF18141 4.3e-30 2
Csa20g081280 UPF1_Zn_bind PF09416 2.2e-73 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Csa20g081280.1 4076 1248aa Csa20g081280.1

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Csa20g081280

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Csa20g081280

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression