RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Csa19g040580	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial
Status	Confidence	Length	3848 bases	Strand	Minus strand
Position	19 : 16971517 - 16975364	RNA binding domain	GatB_Yqey
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Csa19g040580	GatB_Yqey	PF02637	1.1e-48	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Csa19g040580.1	1799	509aa	Csa19g040580.1

Gene Model

Click here to download Csa19g040580's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Csa19g040580's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Csa19g040580

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Csa19g040580

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression