Description

Ensembl ID Csa14g008130 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 12136 bases Strand Minus strand
Position 14 : 2808886 - 2821021 RNA binding domain PPR_3 , AARP2CN , PPR_long , PPR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Csa14g008130 PPR_3 PF13812 3.7e-76 1
Csa14g008130 PPR_3 PF13812 3.7e-76 2
Csa14g008130 PPR_3 PF13812 3.7e-76 3
Csa14g008130 PPR_3 PF13812 3.7e-76 4
Csa14g008130 PPR_3 PF13812 3.7e-76 5
Csa14g008130 PPR_3 PF13812 3.7e-76 6
Csa14g008130 PPR_3 PF13812 3.7e-76 7
Csa14g008130 PPR_3 PF13812 3.7e-76 8
Csa14g008130 PPR_3 PF13812 3.7e-76 9
Csa14g008130 PPR_3 PF13812 3.7e-76 10
Csa14g008130 PPR_3 PF13812 3.8e-76 11
Csa14g008130 PPR_3 PF13812 3.8e-76 12
Csa14g008130 PPR_3 PF13812 3.8e-76 13
Csa14g008130 PPR_3 PF13812 3.8e-76 14
Csa14g008130 PPR_3 PF13812 3.8e-76 15
Csa14g008130 PPR_3 PF13812 3.8e-76 16
Csa14g008130 PPR_3 PF13812 3.8e-76 17
Csa14g008130 PPR_3 PF13812 3.8e-76 18
Csa14g008130 PPR_3 PF13812 3.8e-76 19
Csa14g008130 PPR_3 PF13812 3.8e-76 20
Csa14g008130 AARP2CN PF08142 7e-29 21
Csa14g008130 AARP2CN PF08142 3.6e-28 22
Csa14g008130 AARP2CN PF08142 3.8e-28 23
Csa14g008130 PPR_long PF17177 6.5e-44 24
Csa14g008130 PPR_long PF17177 6.5e-44 25
Csa14g008130 PPR_long PF17177 6.6e-44 26
Csa14g008130 PPR_long PF17177 6.6e-44 27
Csa14g008130 PPR PF01535 1.8e-104 28
Csa14g008130 PPR PF01535 1.8e-104 29
Csa14g008130 PPR PF01535 1.8e-104 30
Csa14g008130 PPR PF01535 1.8e-104 31
Csa14g008130 PPR PF01535 1.8e-104 32
Csa14g008130 PPR PF01535 1.8e-104 33
Csa14g008130 PPR PF01535 1.8e-104 34
Csa14g008130 PPR PF01535 1.8e-104 35
Csa14g008130 PPR PF01535 1.8e-104 36
Csa14g008130 PPR PF01535 1.8e-104 37
Csa14g008130 PPR PF01535 1.8e-104 38
Csa14g008130 PPR PF01535 1.8e-104 39
Csa14g008130 PPR PF01535 1.8e-104 40
Csa14g008130 PPR PF01535 1.8e-104 41
Csa14g008130 PPR PF01535 1.8e-104 42
Csa14g008130 PPR PF01535 1.8e-104 43
Csa14g008130 PPR PF01535 1.9e-104 44
Csa14g008130 PPR PF01535 1.9e-104 45
Csa14g008130 PPR PF01535 1.9e-104 46
Csa14g008130 PPR PF01535 1.9e-104 47
Csa14g008130 PPR PF01535 1.9e-104 48
Csa14g008130 PPR PF01535 1.9e-104 49
Csa14g008130 PPR PF01535 1.9e-104 50
Csa14g008130 PPR PF01535 1.9e-104 51
Csa14g008130 PPR PF01535 1.9e-104 52
Csa14g008130 PPR PF01535 1.9e-104 53
Csa14g008130 PPR PF01535 1.9e-104 54
Csa14g008130 PPR PF01535 1.9e-104 55
Csa14g008130 PPR PF01535 1.9e-104 56
Csa14g008130 PPR PF01535 1.9e-104 57
Csa14g008130 PPR PF01535 1.9e-104 58
Csa14g008130 PPR PF01535 1.9e-104 59

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Csa14g008130.1 7464 2381aa Csa14g008130.1
- Csa14g008130.2 7443 2374aa Csa14g008130.2
- Csa14g008130.3 3931 1177aa Csa14g008130.3

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Csa14g008130

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Csa14g008130

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression