Description

Ensembl ID Csa13g030880 Gene ID Accession -
Symbol Alias - Full Name Protein RRC1
Status Confidence Length 13601 bases Strand Minus strand
Position 13 : 12226011 - 12239611 RNA binding domain RRM_1 , Surp , cwf21 , CID
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Csa13g030880 RRM_1 PF00076 2e-11 1
Csa13g030880 RRM_1 PF00076 2.1e-11 2
Csa13g030880 Surp PF01805 7.2e-63 3
Csa13g030880 Surp PF01805 7.2e-63 4
Csa13g030880 Surp PF01805 7.2e-63 5
Csa13g030880 Surp PF01805 7.2e-63 6
Csa13g030880 Surp PF01805 7.5e-63 7
Csa13g030880 Surp PF01805 7.5e-63 8
Csa13g030880 Surp PF01805 7.5e-63 9
Csa13g030880 Surp PF01805 7.5e-63 10
Csa13g030880 cwf21 PF08312 2.5e-15 11
Csa13g030880 cwf21 PF08312 2.5e-15 12
Csa13g030880 cwf21 PF08312 6.6e-15 13
Csa13g030880 cwf21 PF08312 6.6e-15 14
Csa13g030880 CID PF04818 8.9e-09 15
Csa13g030880 CID PF04818 7.1e-08 16

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Csa13g030880.2 5329 1674aa Csa13g030880.2
- Csa13g030880.1 5401 1698aa Csa13g030880.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Csa13g030880

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Csa13g030880

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression