Description

Ensembl ID Csa12g001580 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 10876 bases Strand Minus strand
Position 12 : 261208 - 272083 RNA binding domain PROCT , PRP8_domainIV , PRO8NT , PROCN , RRM_4 , U5_2-snRNA_bdg
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Csa12g001580 PROCT PF08084 3.8e-50 1
Csa12g001580 PRP8_domainIV PF12134 2.7e-48 2
Csa12g001580 PRO8NT PF08082 1.1e-29 3
Csa12g001580 PROCN PF08083 4.9e-227 4
Csa12g001580 RRM_4 PF10598 4.1e-43 5
Csa12g001580 U5_2-snRNA_bdg PF10597 7.6e-56 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Csa12g001580.1 5950 1680aa Csa12g001580.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Csa12g001580

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Csa12g001580

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression