Description

Ensembl ID Csa10g001500 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 16056 bases Strand Minus strand
Position 10 : 245730 - 261785 RNA binding domain PROCT , PRP8_domainIV , PRO8NT , U6-snRNA_bdg , PROCN , RRM_4 , U5_2-snRNA_bdg
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Csa10g001500 PROCT PF08084 1.6e-73 1
Csa10g001500 PROCT PF08084 1.6e-73 2
Csa10g001500 PRP8_domainIV PF12134 2.5e-122 3
Csa10g001500 PRO8NT PF08082 7.3e-82 4
Csa10g001500 U6-snRNA_bdg PF10596 3.2e-178 5
Csa10g001500 U6-snRNA_bdg PF10596 3.2e-178 6
Csa10g001500 PROCN PF08083 9.6e-194 7
Csa10g001500 PROCN PF08083 9.6e-194 8
Csa10g001500 RRM_4 PF10598 8.5e-43 9
Csa10g001500 U5_2-snRNA_bdg PF10597 3.9e-58 10
Csa10g001500 U5_2-snRNA_bdg PF10597 3.9e-58 11

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Csa10g001500.1 9246 3081aa Csa10g001500.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Csa10g001500

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Csa10g001500

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression