Description

Ensembl ID Csa08g022670 Gene ID Accession -
Symbol Alias - Full Name Protein RRC1
Status Confidence Length 12504 bases Strand Minus strand
Position 8 : 9690047 - 9702550 RNA binding domain RRM_1 , Surp , cwf21 , CID
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Csa08g022670 RRM_1 PF00076 6e-21 1
Csa08g022670 RRM_1 PF00076 6e-21 2
Csa08g022670 RRM_1 PF00076 6.4e-21 3
Csa08g022670 RRM_1 PF00076 6.4e-21 4
Csa08g022670 Surp PF01805 9.6e-47 5
Csa08g022670 Surp PF01805 9.6e-47 6
Csa08g022670 Surp PF01805 9.6e-47 7
Csa08g022670 Surp PF01805 1.1e-46 8
Csa08g022670 Surp PF01805 1.1e-46 9
Csa08g022670 Surp PF01805 1.1e-46 10
Csa08g022670 cwf21 PF08312 3.7e-07 11
Csa08g022670 cwf21 PF08312 3.9e-07 12
Csa08g022670 CID PF04818 9.6e-20 13
Csa08g022670 CID PF04818 9.6e-20 14
Csa08g022670 CID PF04818 1.1e-19 15
Csa08g022670 CID PF04818 1.1e-19 16

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Csa08g022670.1 5639 1797aa Csa08g022670.1
- Csa08g022670.2 5489 1747aa Csa08g022670.2

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Csa08g022670

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Csa08g022670

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression