Description

Ensembl ID Csa02g005230 Gene ID Accession -
Symbol Alias - Full Name DNA mismatch repair protein MSH6
Status Confidence Length 8267 bases Strand Plus strand
Position 2 : 1349597 - 1357863 RNA binding domain MutS_II
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Csa02g005230 MutS_II PF05188 3.6e-12 1
Csa02g005230 MutS_II PF05188 2.2e-09 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Csa02g005230.2 4536 1386aa Csa02g005230.2
- Csa02g005230.1 4940 1494aa Csa02g005230.1

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Csa02g005230

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Csa02g005230

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression