RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Cla97C04G070360	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Translation factor GUF1 homolog, mitochondrial
Status	Confidence	Length	72792 bases	Strand	Minus strand
Position	4 : 11349872 - 11422663	RNA binding domain	GTP_EFTU , MMR_HSR1 , GTP_EFTU_D2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Cla97C04G070360	GTP_EFTU	PF00009	2.4e-54	1
Cla97C04G070360	MMR_HSR1	PF01926	2.6e-05	2
Cla97C04G070360	GTP_EFTU_D2	PF03144	3.1e-10	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Cla97C04G070360.1	1605	535aa	Cla97C04G070360.1

Gene Model

Click here to download Cla97C04G070360's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Cla97C04G070360's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Cla97C04G070360

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Cla97C04G070360

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression