RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Cla97C02G045620	Gene ID		Accession	-
Symbol		Alias	-	Full Name	zinc finger CCCH domain-containing protein 25
Status	Confidence	Length	2931 bases	Strand	Plus strand
Position	2 : 33622230 - 33625160	RNA binding domain	zf-CCCH , RRM_1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Cla97C02G045620	zf-CCCH	PF00642	5.1e-05	1
Cla97C02G045620	RRM_1	PF00076	1.1e-21	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Cla97C02G045620.1	1182	393aa	Cla97C02G045620.1

Gene Model

Click here to download Cla97C02G045620's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Cla97C02G045620's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Cla97C02G045620

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Cla97C02G045620

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression