RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Cla97C02G039660	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Zinc finger CCCH domain-containing protein 53
Status	Confidence	Length	2742 bases	Strand	Minus strand
Position	2 : 27534370 - 27537111	RNA binding domain	zf-CCCH , RRM_1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Cla97C02G039660	zf-CCCH	PF00642	9.2e-05	1
Cla97C02G039660	RRM_1	PF00076	9.7e-06	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Cla97C02G039660.1	2199	732aa	Cla97C02G039660.1

Gene Model

Click here to download Cla97C02G039660's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Cla97C02G039660's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Cla97C02G039660

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Cla97C02G039660

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression