RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Ccrd_011366	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Armadillo-type fold
Status	Confidence	Length	11013 bases	Strand	Minus strand
Position	scaffold_99 : 110895 - 121907	RNA binding domain	MIF4G_like , MIF4G_like_2 , MIF4G
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
KVI10259	MIF4G_like	PF09088	6.4e-38	1
KVI10259	MIF4G_like_2	PF09090	9.5e-25	2
KVI10259	MIF4G	PF02854	9.4e-25	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	KVI10259	2403	800aa	KVI10259

Gene Model

Click here to download Ccrd_011366's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Ccrd_011366's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Ccrd_011366

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Ccrd_011366

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression