Description

Ensembl ID Cav11g12980 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 7493 bases Strand Minus strand
Position ca11 : 19556462 - 19563954 RNA binding domain EF_TS , S1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Cav11g12980 EF_TS PF00889 2.2e-59 1
Cav11g12980 EF_TS PF00889 2.2e-59 2
Cav11g12980 S1 PF00575 1.6e-24 3
Cav11g12980 S1 PF00575 1.6e-24 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Cav11g12980.t1 3841 1156aa Cav11g12980.t1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Cav11g12980

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Cav11g12980

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression