Description

Ensembl ID Cav09g11230 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 7300 bases Strand Minus strand
Position ca9 : 16173885 - 16181184 RNA binding domain tRNA-synt_2d , tRNA-synt_His , HGTP_anticodon , tRNA-synt_2b
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Cav09g11230 tRNA-synt_2d PF01409 0.00029 1
Cav09g11230 tRNA-synt_His PF13393 5.9e-38 2
Cav09g11230 tRNA-synt_His PF13393 5.9e-38 3
Cav09g11230 HGTP_anticodon PF03129 7.9e-09 4
Cav09g11230 tRNA-synt_2b PF00587 4.3e-09 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Cav09g11230.t1 1818 546aa Cav09g11230.t1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Cav09g11230

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Cav09g11230

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression