RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Cav04g18090	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	5548 bases	Strand	Plus strand
Position	ca4 : 29825853 - 29831400	RNA binding domain	FF
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Cav04g18090	FF	PF01846	1e-18	1
Cav04g18090	FF	PF01846	1e-18	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Cav04g18090.t1	1214	296aa	Cav04g18090.t1

Gene Model

Click here to download Cav04g18090's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Cav04g18090's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Cav04g18090

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Cav04g18090

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression