| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | Cav03g06250 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
12527 bases |
Strand |
Minus strand |
| Position |
ca3 : 5665301 - 5677827 |
RNA binding domain |
ResIII , DEAD , Ribonucleas_3_3 , PAZ , Dicer_dimer , Ribonuclease_3 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| Cav03g06250 |
ResIII |
PF04851 |
9.6e-09 |
1 |
| Cav03g06250 |
DEAD |
PF00270 |
2.8e-10 |
2 |
| Cav03g06250 |
Ribonucleas_3_3 |
PF14622 |
4.6e-21 |
3 |
| Cav03g06250 |
PAZ |
PF02170 |
6.6e-16 |
4 |
| Cav03g06250 |
Dicer_dimer |
PF03368 |
6.1e-15 |
5 |
| Cav03g06250 |
Ribonuclease_3 |
PF00636 |
2.2e-47 |
6 |
| Cav03g06250 |
Ribonuclease_3 |
PF00636 |
2.2e-47 |
7 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
Cav03g06250.t1 |
4422 |
1418aa |
Cav03g06250.t1 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| Cav03g06250 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| Cav03g06250 | | | | | | | | |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |