RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Cav02g05210	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	4645 bases	Strand	Plus strand
Position	ca2 : 4481338 - 4485982	RNA binding domain	Calreticulin
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Cav02g05210	Calreticulin	PF00262	2.3e-77	1
Cav02g05210	Calreticulin	PF00262	2.3e-77	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Cav02g05210.t1	2052	446aa	Cav02g05210.t1

Gene Model

Click here to download Cav02g05210's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Cav02g05210's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Cav02g05210

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Cav02g05210

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression