RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	CICLE_v100232702mg	Gene ID		Accession	-
Symbol		Alias	-	Full Name	hypothetical protein
Status	Confidence	Length	3059 bases	Strand	Minus strand
Position	KI536661 : 38503204 - 38506262	RNA binding domain	tRNA-synt_His , HGTP_anticodon , HGTP_anticodon2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ESR56275	tRNA-synt_His	PF13393	5.5e-06	1
ESR56275	HGTP_anticodon	PF03129	0.00024	2
ESR56275	HGTP_anticodon2	PF12745	4.6e-08	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ESR56275	744	247aa	ESR56275

Gene Model

Click here to download CICLE_v100232702mg's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download CICLE_v100232702mg's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
CICLE_v100232702mg

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
CICLE_v100232702mg

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression