RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	CHLRE_16g689647v5	Gene ID		Accession	-
Symbol	Cre16.g689647	Alias	-	Full Name	hypothetical protein
Status	Confidence	Length	10222 bases	Strand	Plus strand
Position	16 : 7622846 - 7633067	RNA binding domain	Piwi , PAZ
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
PNW72538	Piwi	PF02171	5.2e-91	1
PNW72538	PAZ	PF02170	9.7e-09	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	PNW72538	4052	1053aa	PNW72538

Gene Model

Click here to download CHLRE_16g689647v5's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download CHLRE_16g689647v5's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
CHLRE_16g689647v5

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
CHLRE_16g689647v5

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression