RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	CHLRE_09g412350v5	Gene ID		Accession	-
Symbol	Cre09.g412350	Alias	-	Full Name	hypothetical protein
Status	Confidence	Length	11482 bases	Strand	Plus strand
Position	9 : 7207010 - 7218491	RNA binding domain	2OG-FeII_Oxy_2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
PNW79361	2OG-FeII_Oxy_2	PF13532	1.9e-44	1
PNW79362	2OG-FeII_Oxy_2	PF13532	2.5e-44	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	PNW79361	4339	956aa	PNW79361
-	PNW79362	5278	1269aa	PNW79362

Gene Model

Click here to download CHLRE_09g412350v5's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download CHLRE_09g412350v5's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
CHLRE_09g412350v5

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
CHLRE_09g412350v5

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression