RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	CHLRE_06g284500v5	Gene ID		Accession	-
Symbol	Cre06.g284500	Alias	-	Full Name	hypothetical protein
Status	Confidence	Length	3695 bases	Strand	Plus strand
Position	6 : 5461478 - 5465172	RNA binding domain	RNase_PH , RNase_PH_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
PNW82573	RNase_PH	PF01138	4.6e-36	1
PNW82573	RNase_PH_C	PF03725	1.4e-07	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	PNW82573	1709	245aa	PNW82573

Gene Model

Click here to download CHLRE_06g284500v5's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download CHLRE_06g284500v5's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
CHLRE_06g284500v5

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
CHLRE_06g284500v5

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression