RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	CHLRE_02g099200v5	Gene ID		Accession	-
Symbol	Cre02.g099200	Alias	-	Full Name	hypothetical protein
Status	Confidence	Length	12375 bases	Strand	Minus strand
Position	2 : 4325552 - 4337926	RNA binding domain	Symplekin_C , SYMPK_PTA1_N
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
PNW86870	Symplekin_C	PF12295	5.4e-50	1
PNW86870	SYMPK_PTA1_N	PF11935	1.4e-11	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	PNW86870	7455	2007aa	PNW86870

Gene Model

Click here to download CHLRE_02g099200v5's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download CHLRE_02g099200v5's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
CHLRE_02g099200v5

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
CHLRE_02g099200v5

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression