RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	CHC_T00007412001	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	765 bases	Strand	Plus strand
Position	HG002242 : 15942 - 16706	RNA binding domain	UPF0020 , Met_10 , Methyltransf_15
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
CDF40759	UPF0020	PF01170	2.3e-06	1
CDF40759	Met_10	PF02475	1.8e-06	2
CDF40759	Methyltransf_15	PF09445	4.1e-30	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	CDF40759	765	254aa	CDF40759

Gene Model

Click here to download CHC_T00007412001's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download CHC_T00007412001's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
CHC_T00007412001

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
CHC_T00007412001

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression