| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | CEY00_Acc33214 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
TRNA pseudouridine synthase
|
| Status |
Confidence |
Length |
31372 bases |
Strand |
Minus strand |
| Position |
LG29 : 13422008 - 13453379 |
RNA binding domain |
PseudoU_synth_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| PSR85229 |
PseudoU_synth_1 |
PF01416 |
4.4e-11 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
PSR85229 |
1763 |
474aa |
PSR85229 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| CEY00_Acc33214 | actinidia_chinensis | PSS29149 | 29.0576 | 18.5864 | actinidia_chinensis | PSR85229 | 23.4177 | 14.9789 |
| CEY00_Acc33214 | actinidia_chinensis | PSS14178 | 22.5869 | 11.583 | actinidia_chinensis | PSR85229 | 24.6835 | 12.6582 |
| CEY00_Acc33214 | actinidia_chinensis | PSS19836 | 21.7608 | 12.7907 | actinidia_chinensis | PSR85229 | 27.6371 | 16.2447 |
| CEY00_Acc33214 | actinidia_chinensis | PSS09534 | 22.2649 | 11.9002 | actinidia_chinensis | PSR85229 | 24.4726 | 13.0802 |
| CEY00_Acc33214 | actinidia_chinensis | PSS00025 | 26.7416 | 15.0562 | actinidia_chinensis | PSR85229 | 25.1055 | 14.135 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85245 | 31.454 | 21.365 | actinidia_chinensis | PSR85229 | 22.3629 | 15.1899 |
| CEY00_Acc33214 | actinidia_chinensis | PSS17985 | 15.0376 | 7.5188 | actinidia_chinensis | PSR85229 | 4.21941 | 2.1097 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 63.0802 | 49.5781 | papaver_somniferum | RZC56857 | 64.4397 | 50.6466 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 63.924 | 50.8439 | papaver_somniferum | RZC71958 | 67.3333 | 53.5556 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 68.5654 | 57.8059 | ficus_carica | FCD_00017662-RA:cds | 66.4622 | 56.0327 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 64.135 | 52.7426 | beta_vulgaris | KMT17639 | 73.253 | 60.241 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 68.3544 | 58.6498 | citrullus_lanatus | Cla97C06G123540.1 | 72.809 | 62.4719 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 67.9325 | 59.0717 | cucumis_sativus | KGN63901 | 72.5225 | 63.0631 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 65.1899 | 52.7426 | arabidopsis_thaliana | AT5G35400.2 | 65.6051 | 53.0786 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 71.9409 | 59.2827 | populus_trichocarpa | Potri.018G147400.2.v4.1 | 76.1161 | 62.7232 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 64.135 | 52.5316 | brassica_juncea | cds.BjuA08g08290S | 74.1463 | 60.7317 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 63.5021 | 51.6878 | brassica_juncea | cds.BjuB07g14870S | 73.0583 | 59.466 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 63.924 | 52.5316 | brassica_napus | CDY60524 | 73.7226 | 60.5839 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 63.7131 | 52.3207 | brassica_napus | CDY59779 | 73.301 | 60.1942 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 66.4557 | 56.5401 | prunus_dulcis | VVA27929 | 77.0171 | 65.5257 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 65.8228 | 55.0633 | malus_domestica_golden | mRNA:MD13G0203500 | 76.2836 | 63.8142 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 65.8228 | 56.3291 | prunus_persica | ONI27029 | 76.2836 | 65.2812 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 66.2447 | 53.5865 | medicago_truncatula | AET05077 | 72.1839 | 58.3908 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 62.8692 | 53.5865 | lupinus_angustifolius | OIW09888 | 74.1294 | 63.1841 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 68.1435 | 55.0633 | pisum_sativum | Psat7g020960.1.cds | 73.7443 | 59.589 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 68.3544 | 57.5949 | glycine_max | KRH41396 | 72.973 | 61.4865 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 61.8143 | 53.3755 | glycine_max | KRH60111 | 75.7106 | 65.3747 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 70.2532 | 59.2827 | phaseolus_vulgaris | ESW32209 | 75.6818 | 63.8636 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 69.6203 | 58.0169 | vigna_radiata | Vradi07g29190.1 | 59.6745 | 49.7288 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 39.6624 | 31.4346 | capsicum_annuum | PHT76008 | 45.0839 | 35.7314 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 71.308 | 58.0169 | manihot_esculenta | OAY58979 | 74.4493 | 60.5727 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 70.0422 | 58.4388 | vigna_unguiculata | Vigun03g031800.1.v1.2 | 75.4545 | 62.9545 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 68.7764 | 56.1181 | helianthus_annuus | mRNA:HanXRQr2_Chr10g0455671 | 72.7679 | 59.375 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 39.4515 | 33.1224 | solanum_lycopersicum | Solyc07g017250.3.1 | 72.7626 | 61.0895 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 65.6118 | 54.8523 | lactuca_sativa | cds-PLY66499.1 | 75.8537 | 63.4146 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 36.9198 | 30.3797 | oryza_longistaminata | KN539180.1_FGP020 | 51.3196 | 42.2287 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 62.4473 | 50.4219 | oryza_brachyantha | OB06G31510.1 | 70.1422 | 56.6351 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 61.8143 | 50 | avena_sativa_sang | AVESA.00010b.r2.6CG1144970.1.CDS | 70.4327 | 56.9712 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 61.6034 | 48.7342 | avena_sativa_sang | AVESA.00010b.r2.2AG0257430.1.CDS | 69.8565 | 55.2632 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 61.6034 | 50 | avena_sativa_sang | AVESA.00010b.r2.7DG1347240.1.CDS | 69.6897 | 56.5632 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 60.3376 | 48.9451 | lolium_perenne | cds.KYUSt_chr7.4017 | 69.7561 | 56.5854 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 63.5021 | 51.4768 | oryza_glaberrima | ORGLA06G0199500.1 | 71.327 | 57.8199 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 62.0253 | 50.211 | setaria_italica | KQL11064 | 69.6682 | 56.3981 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 61.6034 | 49.5781 | secale_cereale | SECCE2Rv1G0064890.1 | 69.8565 | 56.2201 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 57.384 | 46.8354 | oryza_punctata | OPUNC06G21540.1 | 66.5037 | 54.2787 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 62.4473 | 50 | oryza_rufipogon | ORUFI06G25460.1 | 70.1422 | 56.1611 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 62.0253 | 50.211 | setaria_viridis | TKW21947 | 69.6682 | 56.3981 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 61.3924 | 49.789 | triticum_urartu | TuG1812G0700005218.01.T02 | 68.9573 | 55.9242 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 62.6582 | 50.4219 | ananas_comosus | Aco008314.1.mrna1 | 62.9237 | 50.6356 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 60.9705 | 49.789 | triticum_aestivum | TraesCS7D02G474500.1 | 68.4834 | 55.9242 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 61.3924 | 49.789 | triticum_aestivum | TraesCS7A02G487800.1 | 68.9573 | 55.9242 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 61.3924 | 49.1561 | triticum_aestivum | TraesCS7B02G391100.2 | 68.9573 | 55.2133 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 61.6034 | 49.1561 | sorghum_bicolor | OQU76828 | 69.1943 | 55.2133 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 61.1814 | 50.211 | zea_mays | Zm00001eb274430_P001 | 68.7204 | 56.3981 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 39.0295 | 32.4895 | asparagus_officinalis | ONK70621 | 74 | 61.6 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 19.6203 | 11.3924 | caenorhabditis_elegans | Y73B6BL.29a.1 | 28.882 | 16.7702 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 61.6034 | 50 | avena_sativa_ot3098 | cds.AVESA.00001b.r3.7Dg0002938.1 | 69.6897 | 56.5632 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 55.0633 | 46.6245 | amborella_trichopoda | ERN12556 | 70.3504 | 59.5687 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 51.6878 | 43.4599 | corylus_avellana | Cav06g17900.t1 | 71.2209 | 59.8837 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 69.6203 | 58.8608 | gossypium_raimondii | KJB76616 | 73.0089 | 61.7257 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 70.6751 | 59.9156 | vitis_vinifera | Vitvi02g00808_P001 | 77.3672 | 65.5889 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 65.1899 | 56.1181 | ipomoea_triloba | itb03g23080.t2 | 72.3653 | 62.2951 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 60.7595 | 49.1561 | triticum_turgidum | TRITD7Av1G255360.1 | 69.5652 | 56.2802 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 61.1814 | 49.789 | triticum_turgidum | TRITD7Bv1G205330.2 | 68.7204 | 55.9242 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 62.4473 | 50.211 | eragrostis_curvula | TVU08447 | 69.9764 | 56.2648 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 61.3924 | 49.3671 | oryza_glumipatula | OGLUM06G24990.1 | 69.9519 | 56.25 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 66.0338 | 55.2743 | coffea_canephora | CDP12488 | 76.5281 | 64.0587 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 64.7679 | 50.6329 | arabis_alpina | KFK36937 | 72.4057 | 56.6038 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 63.7131 | 53.5865 | fraxinus_excelsior | FRAEX38873_v2_000254150.1.cds | 71.3948 | 60.0473 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 55.4852 | 44.7257 | oryza_meridionalis | OMERI06G23710.1 | 76.2319 | 61.4493 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 63.2911 | 51.2658 | oryza_indica | BGIOSGA020733-PA | 71.9424 | 58.2734 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 69.1983 | 59.0717 | pistacia_vera | cds-EVM0002064.1 | 76.2791 | 65.1163 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 70.6751 | 58.8608 | quercus_suber | cds-POE76937.1 | 70.9746 | 59.1102 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 59.9156 | 49.5781 | cynara_cardunculus | KVH87652 | 50.0882 | 41.4462 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 69.4093 | 58.6498 | juglans_regia | cds.Jr15_11930_p1 | 74.4344 | 62.8959 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 65.4008 | 52.3207 | arabidopsis_halleri | g24804.t1 | 73.8095 | 59.0476 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 63.7131 | 52.1097 | eutrema_salsugineum | ESQ44539 | 71.9048 | 58.8095 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 62.8692 | 52.5316 | chenopodium_quinoa | AUR62027987-RA:cds | 64.6421 | 54.013 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 63.5021 | 53.7975 | chenopodium_quinoa | AUR62020726-RA:cds | 71.6667 | 60.7143 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 65.6118 | 54.4304 | rosa_chinensis | PRQ36988 | 75.8537 | 62.9268 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 62.0253 | 50 | leersia_perrieri | LPERR06G19730.3 | 70.6731 | 56.9712 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 63.0802 | 51.0549 | oryza_barthii | OBART06G23780.1 | 72.2222 | 58.4541 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 41.7722 | 32.9114 | selaginella_moellendorffii | EFJ08007 | 68.5121 | 53.9792 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 41.7722 | 32.9114 | selaginella_moellendorffii | EFJ16106 | 68.5121 | 53.9792 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 45.1477 | 35.865 | daucus_carota | KZN01920 | 66.875 | 53.125 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 61.6034 | 50.4219 | kalanchoe_fedtschenkoi | Kaladp0038s0119.1.v1.1 | 66.2132 | 54.195 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 58.4388 | 47.6793 | saccharum_spontaneum | Sspon.08G0004280-2B-mRNA-1:cds | 69.598 | 56.7839 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 61.3924 | 49.789 | triticum_dicoccoides | TRIDC7AG067980.5 | 67.8322 | 55.0117 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 60.1266 | 48.1013 | triticum_dicoccoides | TRIDC7BG061850.1 | 71.9697 | 57.5758 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 67.2996 | 56.7511 | corymbia_citriodora | cds-KAF8038673.1 | 68.6021 | 57.8495 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 61.6034 | 48.5232 | echinochloa_crusgalli | scaffold25.598.cds | 69.1943 | 54.5024 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 61.1814 | 48.1013 | echinochloa_crusgalli | scaffold92.285.cds | 68.7204 | 54.0284 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 54.4304 | 43.6709 | echinochloa_crusgalli | scaffold33.85.cds | 69.7297 | 55.9459 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 60.7595 | 48.9451 | eragrostis_tef | Et_2A_017000.CDS | 69.0648 | 55.6355 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 62.4473 | 50.211 | eragrostis_tef | Et_2B_021004.CDS | 70.8134 | 56.9378 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 63.924 | 51.2658 | camelina_sativa | Csa10g038660.1 | 72.8365 | 58.4135 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 64.9789 | 51.2658 | camelina_sativa | Csa11g044810.1 | 73.3333 | 57.8571 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 59.9156 | 46.6245 | camelina_sativa | Csa12g069620.1 | 72.6343 | 56.5217 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 70.2532 | 59.0717 | quercus_lobata | QL11p008681:mrna | 73.0263 | 61.4035 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 65.1899 | 52.3207 | arabidopsis_lyrata | scaffold_703409.1 | 73.5714 | 59.0476 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 68.7764 | 57.173 | citrus_clementina | ESR66422 | 72.9306 | 60.6264 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 64.9789 | 53.1646 | brassica_rapa_ro18 | A08p014690.1_BraROA.1 | 73.6842 | 60.2871 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 61.6034 | 49.789 | panicum_hallii | PUZ59612 | 69.5238 | 56.1905 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 61.1814 | 49.1561 | hordeum_vulgare | HORVU.MOREX.r3.7HG0739020.1 | 69.5444 | 55.8753 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 67.0886 | 55.2743 | olea_europaea | OE9A083172C2 | 73.1034 | 60.2299 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 60.9705 | 49.789 | aegilops_tauschii | AET7Gv21189100.10 | 68.4834 | 55.9242 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 63.924 | 52.1097 | brassica_oleracea | Bo8g030560.1 | 73.5437 | 59.9515 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 64.135 | 52.9536 | musa_acuminata | Ma03_p28790.2 | 71.8676 | 59.3381 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 70.0422 | 58.6498 | vigna_angularis | KOM29821 | 71.0921 | 59.5289 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 71.9409 | 60.3376 | theobroma_cacao | EOY32187 | 76.4574 | 64.1256 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 63.0802 | 51.0549 | oryza_nivara | ONIVA06G27940.1 | 72.2222 | 58.4541 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 56.962 | 47.0464 | trifolium_pratense | Tp57577_TGAC_v2_mRNA34083 | 69.5876 | 57.4742 |
| CEY00_Acc33214 | actinidia_chinensis | PSR85229 | 65.1899 | 52.9536 | dioscorea_rotundata | DRNTG_16204.1 | 73.9234 | 60.0478 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
