RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | CEY00_Acc30077 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
suppressor of gene silencing like protein
|
Status |
Confidence |
Length |
5869 bases |
Strand |
Minus strand |
Position |
LG26 : 15489049 - 15494917 |
RNA binding domain |
XS |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
PSR89882 |
XS |
PF03468 |
2.6e-19 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
PSR89882 |
3905 |
990aa |
PSR89882 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
CEY00_Acc30077 | actinidia_chinensis | PSR86507 | 85.5701 | 80.6256 | actinidia_chinensis | PSR89882 | 85.6566 | 80.7071 |
CEY00_Acc30077 | actinidia_chinensis | PSR98041 | 40.7098 | 25.9916 | actinidia_chinensis | PSR89882 | 39.3939 | 25.1515 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
CEY00_Acc30077 | actinidia_chinensis | PSR89882 | 36.2626 | 23.5354 | populus_trichocarpa | Potri.009G147201.1.v4.1 | 30.4237 | 19.7458 |
CEY00_Acc30077 | actinidia_chinensis | PSR89882 | 41.7172 | 28.1818 | capsicum_annuum | PHT69157 | 38.743 | 26.1726 |
CEY00_Acc30077 | actinidia_chinensis | PSR89882 | 43.2323 | 28.9899 | solanum_lycopersicum | Solyc11g066990.2.1 | 42.672 | 28.6142 |
CEY00_Acc30077 | actinidia_chinensis | PSR89882 | 30.404 | 18.4848 | triticum_urartu | TuG1812G0500001305.01.T01 | 35.2872 | 21.4537 |
CEY00_Acc30077 | actinidia_chinensis | PSR89882 | 34.4444 | 21.3131 | triticum_aestivum | TraesCS5D02G127800.1 | 33.0747 | 20.4656 |
CEY00_Acc30077 | actinidia_chinensis | PSR89882 | 34.8485 | 21.6162 | triticum_aestivum | TraesCS5B02G119000.1 | 33.269 | 20.6365 |
CEY00_Acc30077 | actinidia_chinensis | PSR89882 | 34.4444 | 21.2121 | triticum_aestivum | TraesCS5A02G114000.1 | 32.9469 | 20.2899 |
CEY00_Acc30077 | actinidia_chinensis | PSR89882 | 32.1212 | 20 | zea_mays | Zm00001eb138970_P002 | 28.1665 | 17.5376 |
CEY00_Acc30077 | actinidia_chinensis | PSR89882 | 36.5657 | 24.0404 | amborella_trichopoda | ERN13144 | 38.6752 | 25.4274 |
CEY00_Acc30077 | actinidia_chinensis | PSR89882 | 43.2323 | 31.2121 | vitis_vinifera | Vitvi06g01419_P001 | 43.8974 | 31.6923 |
CEY00_Acc30077 | actinidia_chinensis | PSR89882 | 34.8485 | 21.6162 | triticum_turgidum | TRITD5Bv1G069320.3 | 33.269 | 20.6365 |
CEY00_Acc30077 | actinidia_chinensis | PSR89882 | 34.3434 | 21.1111 | triticum_turgidum | TRITD5Av1G079690.2 | 32.8502 | 20.1932 |
CEY00_Acc30077 | actinidia_chinensis | PSR89882 | 33.1313 | 20.404 | leersia_perrieri | LPERR12G04130.1 | 32.9317 | 20.2811 |
CEY00_Acc30077 | actinidia_chinensis | PSR89882 | 34.8485 | 21.6162 | triticum_dicoccoides | TRIDC5BG020760.3 | 33.3333 | 20.6763 |
CEY00_Acc30077 | actinidia_chinensis | PSR89882 | 34.5455 | 21.2121 | triticum_dicoccoides | TRIDC5AG018810.3 | 31.0627 | 19.0736 |
CEY00_Acc30077 | actinidia_chinensis | PSR89882 | 33.2323 | 20.8081 | hordeum_vulgare | HORVU.MOREX.r3.5HG0455200.1 | 31.7261 | 19.865 |
CEY00_Acc30077 | actinidia_chinensis | PSR89882 | 34.6465 | 21.4141 | aegilops_tauschii | AET5Gv20329200.2 | 33.2687 | 20.5626 |
CEY00_Acc30077 | actinidia_chinensis | PSR89882 | 36.7677 | 24.5455 | nymphaea_colorata | NC11G0117360.1:cds | 38.6412 | 25.7962 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |