Description

Ensembl ID CEY00_Acc22160 Gene ID Accession -
Symbol Alias - Full Name Pre-mRNA-processing-splicing factor 8A like
Status Confidence Length 16173 bases Strand Plus strand
Position LG23 : 17307112 - 17323284 RNA binding domain PROCT , PRO8NT , U6-snRNA_bdg , PROCN , RRM_4 , U5_2-snRNA_bdg
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
PSR96025 PROCT PF08084 2.4e-20 1
PSR96025 PRO8NT PF08082 2.9e-129 2
PSR96025 PRO8NT PF08082 2.9e-129 3
PSR96025 U6-snRNA_bdg PF10596 2.1e-90 4
PSR96025 PROCN PF08083 7.8e-234 5
PSR96025 RRM_4 PF10598 6.9e-47 6
PSR96025 U5_2-snRNA_bdg PF10597 4.1e-68 7

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- PSR96025 7156 2250aa PSR96025

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
CEY00_Acc22160actinidia_chinensisPSS1783785.172683.8943actinidia_chinensisPSR9602588.844487.5111
CEY00_Acc22160actinidia_chinensisPSR9606854.152852.6578actinidia_chinensisPSR9602514.488914.0889
CEY00_Acc22160actinidia_chinensisPSS0751678.5173.0659actinidia_chinensisPSR9602512.177811.3333

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
CEY00_Acc22160actinidia_chinensisPSR9602575.288961.5556chondrus_crispusCDF3605869.942257.1841
CEY00_Acc22160actinidia_chinensisPSR9602582.666774.3556chlamydomonas_reinhardtiiPNW8813877.564669.7665
CEY00_Acc22160actinidia_chinensisPSR9602514.577813.6papaver_somniferumRZC5158486.772580.9524
CEY00_Acc22160actinidia_chinensisPSR960258885.7333papaver_somniferumRZC6201584.005181.8413
CEY00_Acc22160actinidia_chinensisPSR9602528.711124.1778papaver_somniferumRZC4998954.745846.1017
CEY00_Acc22160actinidia_chinensisPSR9602588.044485.7778papaver_somniferumRZC5384084.047581.8838
CEY00_Acc22160actinidia_chinensisPSR9602588.533386.6222citrullus_lanatusCla97C09G165170.184.874383.0422
CEY00_Acc22160actinidia_chinensisPSR9602588.533386.5333cucumis_meloMELO3C023427.2.184.874382.957
CEY00_Acc22160actinidia_chinensisPSR9602588.577886.5778cucumis_sativusKGN4526284.916982.9996
CEY00_Acc22160actinidia_chinensisPSR9602524.355622.6667brassica_napusCDX9149993.675287.1795
CEY00_Acc22160actinidia_chinensisPSR9602587.155684marchantia_polymorphaPTQ4456683.269680.2548
CEY00_Acc22160actinidia_chinensisPSR9602587.777886.1333capsicum_annuumPHT7577683.580282.0144
CEY00_Acc22160actinidia_chinensisPSR9602588.133386.3556solanum_tuberosumPGSC0003DMT40007394783.005481.3311
CEY00_Acc22160actinidia_chinensisPSR9602588.488986.2222sesamum_indicumSIN_1009631.t83.655581.5126
CEY00_Acc22160actinidia_chinensisPSR960250.2222220.222222helianthus_annuusCDS:HanXRQr2_Chr03g0092901.155
CEY00_Acc22160actinidia_chinensisPSR9602588.133386.3556solanum_lycopersicumSolyc07g008880.3.183.179581.5017
CEY00_Acc22160actinidia_chinensisPSR960252.933332.53333oryza_longistaminataAMDW01021966.1_FGP00190.41178.0822
CEY00_Acc22160actinidia_chinensisPSR960257.955567.91111oryza_longistaminataAMDW01038331.1_FGP00186.057785.5769
CEY00_Acc22160actinidia_chinensisPSR9602585.282.6222oryza_longistaminataKN538867.1_FGP02075.561773.2755
CEY00_Acc22160actinidia_chinensisPSR9602584.933382.4889oryza_longistaminataKN540011.1_FGP00583.889481.475
CEY00_Acc22160actinidia_chinensisPSR9602584.977882.4444oryza_brachyanthaOB06G14120.183.933381.4311
CEY00_Acc22160actinidia_chinensisPSR9602587.155684.4avena_sativa_sangAVESA.00010b.r2.5AG0794180.1.CDS83.128480.5002
CEY00_Acc22160actinidia_chinensisPSR9602533.466731.6444avena_sativa_sangAVESA.00010b.r2.7DG1340470.1.CDS67.89964.202
CEY00_Acc22160actinidia_chinensisPSR9602576.577874.1778avena_sativa_sangAVESA.00010b.r2.1DG0131270.1.CDS81.120578.5782
CEY00_Acc22160actinidia_chinensisPSR9602587.066784.4avena_sativa_sangAVESA.00010b.r2.5CG0868840.1.CDS83.008580.4661
CEY00_Acc22160actinidia_chinensisPSR9602587.066784.4889avena_sativa_sangAVESA.00010b.r2.7AG1204950.1.CDS83.008580.5508
CEY00_Acc22160actinidia_chinensisPSR9602587.155684.4444avena_sativa_sangAVESA.00010b.r2.4CG1278970.1.CDS83.128480.5426
CEY00_Acc22160actinidia_chinensisPSR9602586.977884.2222lolium_perennecds.KYUSt_chr4.4947082.994180.3647
CEY00_Acc22160actinidia_chinensisPSR9602586.666783.9556lolium_perennecds.KYUSt_chr7.3680582.243879.671
CEY00_Acc22160actinidia_chinensisPSR9602587.022284.3111oryza_glaberrimaORGLA06G0041600.183.319180.7234
CEY00_Acc22160actinidia_chinensisPSR9602586.483.6444oryza_glaberrimaORGLA05G0040900.182.723480.0851
CEY00_Acc22160actinidia_chinensisPSR9602586.884.0444setaria_italicaKQL0958983.07180.4339
CEY00_Acc22160actinidia_chinensisPSR9602587.284.4444oryza_punctataOPUNC06G04280.182.402479.7984
CEY00_Acc22160actinidia_chinensisPSR9602587.511184.4889oryza_punctataOPUNC05G04030.179.331276.5915
CEY00_Acc22160actinidia_chinensisPSR9602587.022284.3111oryza_rufipogonORUFI06G04460.182.268979.7059
CEY00_Acc22160actinidia_chinensisPSR9602586.977884.1778oryza_rufipogonORUFI05G04600.183.31280.6301
CEY00_Acc22160actinidia_chinensisPSR9602587.022284.2667setaria_viridisTKW2002382.860880.237
CEY00_Acc22160actinidia_chinensisPSR9602586.977883.4667physcomitrium_patensPp3c24_20910V3.183.847580.4627
CEY00_Acc22160actinidia_chinensisPSR9602587.066783.4667physcomitrium_patensPp3c8_25090V3.383.897280.4283
CEY00_Acc22160actinidia_chinensisPSR9602588.044485.6444ananas_comosusAco011503.1.mrna183.375481.1027
CEY00_Acc22160actinidia_chinensisPSR960250.04444440triticum_aestivumTraesCS1B02G415700.10.8620690
CEY00_Acc22160actinidia_chinensisPSR9602500triticum_aestivumTraesCS1B02G416400.100
CEY00_Acc22160actinidia_chinensisPSR9602587.022284.2222triticum_aestivumTraesCS5B02G193600.183.036580.3647
CEY00_Acc22160actinidia_chinensisPSR9602586.711184.1333triticum_aestivumTraesCS7B02G029700.182.494780.0423
CEY00_Acc22160actinidia_chinensisPSR9602587.022284.2667triticum_aestivumTraesCS5A02G189600.183.001380.373
CEY00_Acc22160actinidia_chinensisPSR9602586.755684.1778triticum_aestivumTraesCS7A02G129700.182.641880.1863
CEY00_Acc22160actinidia_chinensisPSR9602500triticum_aestivumTraesCS1B02G368800.100
CEY00_Acc22160actinidia_chinensisPSR9602587.066784.4889sorghum_bicolorOQU7590082.903180.4486
CEY00_Acc22160actinidia_chinensisPSR9602580.266771.1111caenorhabditis_elegansC50C3.6.177.54468.699
CEY00_Acc22160actinidia_chinensisPSR9602586.266783.7333avena_sativa_ot3098cds.AVESA.00001b.r3.7Ag0000863.383.483981.0323
CEY00_Acc22160actinidia_chinensisPSR9602587.066784.3111avena_sativa_ot3098cds.AVESA.00001b.r3.1Dg0003205.182.484279.8737
CEY00_Acc22160actinidia_chinensisPSR9602587.066784.4avena_sativa_ot3098cds.AVESA.00001b.r3.5Cg0003081.183.008580.4661
CEY00_Acc22160actinidia_chinensisPSR9602546.444.7111avena_sativa_ot3098cds.AVESA.00001b.r3.7Dg0003271.174.731672.0115
CEY00_Acc22160actinidia_chinensisPSR9602587.155684.4444avena_sativa_ot3098cds.AVESA.00001b.r3.4Cg0001321.182.498979.9327
CEY00_Acc22160actinidia_chinensisPSR9602581.777872.5333drosophila_melanogasterFBpp008712476.794768.1135
CEY00_Acc22160actinidia_chinensisPSR9602581.672.8889homo_sapiensENSP0000030435078.629570.2355
CEY00_Acc22160actinidia_chinensisPSR9602587.733385.4667amborella_trichopodaERN1797084.071581.8995
CEY00_Acc22160actinidia_chinensisPSR9602587.911185.8222ipomoea_trilobaitb10g15310.t183.389581.4081
CEY00_Acc22160actinidia_chinensisPSR9602587.155684.2667eragrostis_curvulaTVU1238683.093280.339
CEY00_Acc22160actinidia_chinensisPSR9602584.933382.4444oryza_glumipatulaOGLUM06G04590.182.79980.3726
CEY00_Acc22160actinidia_chinensisPSR9602586.533383.8222oryza_glumipatulaOGLUM05G04320.182.640180.0509
CEY00_Acc22160actinidia_chinensisPSR9602588.266786.7111coffea_canephoraCDP1929683.656382.182
CEY00_Acc22160actinidia_chinensisPSR9602587.777885.3333coffea_canephoraCDP1676783.157980.8421
CEY00_Acc22160actinidia_chinensisPSR9602586.977884.1778brachypodium_distachyonKQK1943783.029380.3564
CEY00_Acc22160actinidia_chinensisPSR9602586.884oryza_meridionalisOMERI05G04370.283.035780.3571
CEY00_Acc22160actinidia_chinensisPSR9602581.688979.0222oryza_indicaBGIOSGA021833-PA83.35680.6349
CEY00_Acc22160actinidia_chinensisPSR9602584.888982.3556oryza_indicaBGIOSGA018755-PA83.845581.3433
CEY00_Acc22160actinidia_chinensisPSR9602580.533371.4222ciona_savignyiENSCSAVP0000001333273.241764.9555
CEY00_Acc22160actinidia_chinensisPSR960250.6666670.311111eutrema_salsugineumESQ556856.944443.24074
CEY00_Acc22160actinidia_chinensisPSR9602584.933379.6chara_brauniiGBG6491281.562176.4405
CEY00_Acc22160actinidia_chinensisPSR9602588.311186.7111nicotiana_attenuataOIT2674882.964581.4614
CEY00_Acc22160actinidia_chinensisPSR9602588.266786.5778nicotiana_attenuataOIS9700682.922881.3361
CEY00_Acc22160actinidia_chinensisPSR960257876.7111eucalyptus_grandisKCW7071484.823683.4219
CEY00_Acc22160actinidia_chinensisPSR9602587.511184.6667eucalyptus_grandisKCW7077583.751681.0294
CEY00_Acc22160actinidia_chinensisPSR9602522.933321.7778oryza_sativaOs05t0163250-0192.473187.8136
CEY00_Acc22160actinidia_chinensisPSR9602535.466734.1778oryza_sativaOs06t0167000-0270.619568.0531
CEY00_Acc22160actinidia_chinensisPSR9602584.882.4leersia_perrieriLPERR09G12590.183.831381.4587
CEY00_Acc22160actinidia_chinensisPSR9602587.244484.4889leersia_perrieriLPERR06G04030.182.340679.7399
CEY00_Acc22160actinidia_chinensisPSR9602584.882.2222oryza_barthiiOBART05G04400.183.831381.283
CEY00_Acc22160actinidia_chinensisPSR9602584.933382.4oryza_barthiiOBART06G04500.182.79980.3293
CEY00_Acc22160actinidia_chinensisPSR9602586.622283.4667selaginella_moellendorffiiEFJ2528582.340579.3409
CEY00_Acc22160actinidia_chinensisPSR9602588.755686.8889daucus_carotaKZM8844084.261682.4894
CEY00_Acc22160actinidia_chinensisPSR9602583.911179.6444daucus_carotaKZM9032481.9877.8116
CEY00_Acc22160actinidia_chinensisPSR9602588.355686.5778kalanchoe_fedtschenkoiKaladp0037s0356.1.v1.184.667882.9642
CEY00_Acc22160actinidia_chinensisPSR9602562.355661.1111kalanchoe_fedtschenkoiKaladp0036s0144.1.v1.180.355178.7514
CEY00_Acc22160actinidia_chinensisPSR9602544.755629.8222cyanidioschyzon_merolaeCMH168CT42.045928.0167
CEY00_Acc22160actinidia_chinensisPSR9602511.777811.4222saccharum_spontaneumSspon.08G0013830-2B-mRNA-1:cds94.642991.7857
CEY00_Acc22160actinidia_chinensisPSR960254.311114.17778triticum_dicoccoidesTRIDC3BG009460.357.058855.2941
CEY00_Acc22160actinidia_chinensisPSR9602585.777883.1111triticum_dicoccoidesTRIDC5BG033280.183.767481.1632
CEY00_Acc22160actinidia_chinensisPSR960250.04444440triticum_dicoccoidesTRIDC1BG065700.20.9009010
CEY00_Acc22160actinidia_chinensisPSR9602500triticum_dicoccoidesTRIDC1BG065780.300
CEY00_Acc22160actinidia_chinensisPSR9602585.688983.1556triticum_dicoccoidesTRIDC7BG004510.283.318980.8557
CEY00_Acc22160actinidia_chinensisPSR9602581.511173.7778ostreococcus_lucimarinusABO9869479.051771.5517
CEY00_Acc22160actinidia_chinensisPSR9602588.488986.6222corymbia_citriodoracds-KAF8025372.184.687482.9009
CEY00_Acc22160actinidia_chinensisPSR9602577.111174.4corymbia_citriodoracds-KAF8041762.182.46279.5627
CEY00_Acc22160actinidia_chinensisPSR9602587.066784.4444echinochloa_crusgalliscaffold10.380.cds82.903180.4063
CEY00_Acc22160actinidia_chinensisPSR9602587.022284.4echinochloa_crusgalliscaffold367.55.cds82.895980.398
CEY00_Acc22160actinidia_chinensisPSR9602587.066784.3556echinochloa_crusgalliscaffold34.383.cds82.903180.3216
CEY00_Acc22160actinidia_chinensisPSR9602586.266783.5111eragrostis_tefEt_2B_020945.CDS82.913380.2648
CEY00_Acc22160actinidia_chinensisPSR960255.111114.53333eragrostis_tefEt_2B_022554.CDS63.888956.6667
CEY00_Acc22160actinidia_chinensisPSR9602584.133381.4667eragrostis_tefEt_2A_016995.CDS82.699980.0786
CEY00_Acc22160actinidia_chinensisPSR9602587.066784.4444digitaria_exilisDexi4B01G0005870.1:cds82.51980.0337
CEY00_Acc22160actinidia_chinensisPSR9602587.022284.4digitaria_exilisDexi4A01G0005040.1:cds82.860880.3639
CEY00_Acc22160actinidia_chinensisPSR9602569.955661.4222camelina_sativaCsa10g001500.151.087344.8556
CEY00_Acc22160actinidia_chinensisPSR9602569.422254.2222saccharomyces_cerevisiaeYHR165C64.732750.5595
CEY00_Acc22160actinidia_chinensisPSR9602578.355667.8222galdieria_sulphurariaEME3029174.57764.5516
CEY00_Acc22160actinidia_chinensisPSR9602586.977884.2222panicum_halliiPUZ6203082.818580.1947
CEY00_Acc22160actinidia_chinensisPSR9602586.844484.2667hordeum_vulgareHORVU.MOREX.r3.7HG0656060.182.796680.339
CEY00_Acc22160actinidia_chinensisPSR9602586.933384.2667hordeum_vulgareHORVU.MOREX.r3.5HG0476410.183.022180.4754
CEY00_Acc22160actinidia_chinensisPSR9602588.044485.8222nymphaea_colorataNC3G0224200.1:cds84.369782.2402
CEY00_Acc22160actinidia_chinensisPSR9602587.284.4oryza_nivaraONIVA01G08250.374.600872.2053
CEY00_Acc22160actinidia_chinensisPSR9602570.666767.8667oryza_nivaraONIVA05G04750.180.100876.9269
CEY00_Acc22160actinidia_chinensisPSR9602586.533384.6667dioscorea_rotundataDRNTG_32049.185.170683.3333

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression