Description

Ensembl ID CEY00_Acc14799 Gene ID Accession -
Symbol Alias - Full Name TRNA pseudouridine synthase
Status Confidence Length 9311 bases Strand Plus strand
Position LG13 : 10252210 - 10261520 RNA binding domain PseudoU_synth_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
PSS14178 PseudoU_synth_1 PF01416 4.6e-10 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- PSS14178 1818 518aa PSS14178

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
CEY00_Acc14799actinidia_chinensisPSS0953480.614270.6334actinidia_chinensisPSS1417881.081171.0425
CEY00_Acc14799actinidia_chinensisPSS1983630.066418.1063actinidia_chinensisPSS1417834.942121.0425
CEY00_Acc14799actinidia_chinensisPSS1798540.601524.812actinidia_chinensisPSS1417810.42476.37066
CEY00_Acc14799actinidia_chinensisPSS0002530.786518.8764actinidia_chinensisPSS1417826.447916.2162
CEY00_Acc14799actinidia_chinensisPSR8524535.311620.4748actinidia_chinensisPSS1417822.97313.3205
CEY00_Acc14799actinidia_chinensisPSS2914927.486916.2304actinidia_chinensisPSS1417820.270311.9691
CEY00_Acc14799actinidia_chinensisPSR8522924.683512.6582actinidia_chinensisPSS1417822.586911.583

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
CEY00_Acc14799actinidia_chinensisPSS1417833.204621.6216chlamydomonas_reinhardtiiPNW7124126.791317.4455
CEY00_Acc14799actinidia_chinensisPSS1417832.625520.4633chlamydomonas_reinhardtiiPNW8464923.504914.7427
CEY00_Acc14799actinidia_chinensisPSS1417869.498157.1429papaver_somniferumRZC6312268.571456.381
CEY00_Acc14799actinidia_chinensisPSS1417869.11256.3707papaver_somniferumRZC5583969.921957.0312
CEY00_Acc14799actinidia_chinensisPSS1417873.938262.5483ficus_caricaFCD_00014910-RA:cds71.057560.1113
CEY00_Acc14799actinidia_chinensisPSS1417872.200860.2317cannabis_sativa_femalecds.evm.model.06.2078.1.5bd9b13b70.300858.6466
CEY00_Acc14799actinidia_chinensisPSS1417871.428655.7915beta_vulgarisKMT0543168.645653.6178
CEY00_Acc14799actinidia_chinensisPSS1417868.918954.6332citrullus_lanatusCla97C03G051010.170.137555.5992
CEY00_Acc14799actinidia_chinensisPSS1417858.301246.332cucumis_meloMELO3C020498.2.173.658558.5366
CEY00_Acc14799actinidia_chinensisPSS1417858.494245.7529cucumis_sativusKGN6586171.971556.2945
CEY00_Acc14799actinidia_chinensisPSS1417866.409351.9305arabidopsis_thalianaAT2G30320.167.45152.7451
CEY00_Acc14799actinidia_chinensisPSS1417872.779959.2664populus_trichocarpaPotri.013G154200.1.v4.172.559.0385
CEY00_Acc14799actinidia_chinensisPSS1417866.216250.9653brassica_junceacds.BjuA03g43640S48.514937.3409
CEY00_Acc14799actinidia_chinensisPSS1417866.409350.9653brassica_junceacds.BjuB08g46880S68.118852.2772
CEY00_Acc14799actinidia_chinensisPSS1417866.216251.1583brassica_napusCDX8484569.292953.5354
CEY00_Acc14799actinidia_chinensisPSS1417866.216251.1583brassica_napusCDY2401168.653
CEY00_Acc14799actinidia_chinensisPSS1417853.86138.9961marchantia_polymorphaPTQ2920044.145631.962
CEY00_Acc14799actinidia_chinensisPSS1417872.393861.39prunus_dulcisVVA1644672.815561.7476
CEY00_Acc14799actinidia_chinensisPSS1417871.235559.6525malus_domestica_goldenmRNA:MD11G005010069.622658.3019
CEY00_Acc14799actinidia_chinensisPSS1417873.16661.9691prunus_persicaONH9970673.592262.3301
CEY00_Acc14799actinidia_chinensisPSS1417865.637153.2819cajanus_cajanC.cajan_05427.t73.752759.8698
CEY00_Acc14799actinidia_chinensisPSS1417862.548350.5792cajanus_cajanC.cajan_05426.t78.072363.1325
CEY00_Acc14799actinidia_chinensisPSS1417866.216250.9653medicago_truncatulaAES9892771.014554.6584
CEY00_Acc14799actinidia_chinensisPSS1417868.918955.5985medicago_truncatulaAES9892971.257557.485
CEY00_Acc14799actinidia_chinensisPSS1417861.776149.0347lupinus_angustifoliusOIW0260070.796556.1947
CEY00_Acc14799actinidia_chinensisPSS1417869.30556.5637lupinus_angustifoliusOIW0440171.656758.483
CEY00_Acc14799actinidia_chinensisPSS1417863.899649.6139pisum_sativumPsat0s1662g0080.2.cds76.443459.3533
CEY00_Acc14799actinidia_chinensisPSS1417831.467225.2896pisum_sativumPsat2g052720.1.cds69.658155.9829
CEY00_Acc14799actinidia_chinensisPSS1417868.339856.5637glycine_maxKRH7277971.805359.432
CEY00_Acc14799actinidia_chinensisPSS1417868.339853.861glycine_maxKRG8846368.339853.861
CEY00_Acc14799actinidia_chinensisPSS1417868.532854.4402glycine_maxKRH7277768.798454.6512
CEY00_Acc14799actinidia_chinensisPSS1417868.146754.6332phaseolus_vulgarisESW1406668.945355.2734
CEY00_Acc14799actinidia_chinensisPSS1417867.953756.5637phaseolus_vulgarisESW1406569.42857.7909
CEY00_Acc14799actinidia_chinensisPSS1417866.795454.6332vigna_radiataVradi06g06650.162.794951.3612
CEY00_Acc14799actinidia_chinensisPSS1417857.915147.1042vigna_radiataVradi06g06670.161.983550.4132
CEY00_Acc14799actinidia_chinensisPSS1417872.393861.39manihot_esculentaOAY2415373.673962.4754
CEY00_Acc14799actinidia_chinensisPSS1417867.953756.7568vigna_unguiculataVigun08g132200.1.v1.271.111159.3939
CEY00_Acc14799actinidia_chinensisPSS1417866.988454.4402vigna_unguiculataVigun08g132100.1.v1.266.475154.023
CEY00_Acc14799actinidia_chinensisPSS1417874.710464.0927sesamum_indicumSIN_1023215.t68.98459.18
CEY00_Acc14799actinidia_chinensisPSS1417869.498158.3012helianthus_annuusmRNA:HanXRQr2_Chr08g034477170.450159.0998
CEY00_Acc14799actinidia_chinensisPSS1417869.884256.9498solanum_lycopersicumSolyc09g056260.3.171.968258.6481
CEY00_Acc14799actinidia_chinensisPSS1417870.270360.2317lactuca_sativacds-PLY77741.171.372661.1765
CEY00_Acc14799actinidia_chinensisPSS1417864.478850.9653oryza_longistaminataKN539057.1_FGP01164.728751.1628
CEY00_Acc14799actinidia_chinensisPSS1417865.44450.5792oryza_brachyanthaOB03G26360.165.44450.5792
CEY00_Acc14799actinidia_chinensisPSS1417866.795450.9653avena_sativa_sangAVESA.00010b.r2.5DG1000120.1.CDS65.530350
CEY00_Acc14799actinidia_chinensisPSS1417866.409351.1583avena_sativa_sangAVESA.00010b.r2.5AG0807410.1.CDS64.661749.812
CEY00_Acc14799actinidia_chinensisPSS1417866.602350.1931avena_sativa_sangAVESA.00010b.r2.4CG1316950.1.CDS65.340949.2424
CEY00_Acc14799actinidia_chinensisPSS1417861.196946.332lolium_perennecds.KYUSt_chr4.2809569.977952.9801
CEY00_Acc14799actinidia_chinensisPSS1417864.285750.5792oryza_glaberrimaORGLA03G0159600.164.534950.7752
CEY00_Acc14799actinidia_chinensisPSS1417866.023251.1583setaria_italicaKQK9097465.89651.0597
CEY00_Acc14799actinidia_chinensisPSS1417866.409350.9653secale_cerealeSECCE4Rv1G0240200.165.399250.1901
CEY00_Acc14799actinidia_chinensisPSS1417864.285750.7722oryza_punctataOPUNC03G16140.163.915550.4798
CEY00_Acc14799actinidia_chinensisPSS1417864.478850.9653oryza_rufipogonORUFI03G17200.164.728751.1628
CEY00_Acc14799actinidia_chinensisPSS1417865.830150.9653setaria_viridisTKV9621465.703350.8671
CEY00_Acc14799actinidia_chinensisPSS1417865.830150.7722triticum_urartuTuG1812G0400001824.01.T0364.828950
CEY00_Acc14799actinidia_chinensisPSS1417853.281938.9961physcomitrium_patensPp3c2_21310V3.143.057731.5133
CEY00_Acc14799actinidia_chinensisPSS1417869.11257.722ananas_comosusAco001616.1.mrna166.79155.7836
CEY00_Acc14799actinidia_chinensisPSS1417865.830150.7722triticum_aestivumTraesCS4D02G170500.165.076350.1908
CEY00_Acc14799actinidia_chinensisPSS1417865.830150.9653triticum_aestivumTraesCS4A02G136700.164.828950.1901
CEY00_Acc14799actinidia_chinensisPSS1417865.637150.3861triticum_aestivumTraesCS4B02G167800.165.009649.9044
CEY00_Acc14799actinidia_chinensisPSS1417866.216249.4208sorghum_bicolorEER9489065.961549.2308
CEY00_Acc14799actinidia_chinensisPSS1417866.409350.7722zea_maysZm00001eb016190_P00166.666750.969
CEY00_Acc14799actinidia_chinensisPSS1417868.532858.1081asparagus_officinalisONK6245858.677749.7521
CEY00_Acc14799actinidia_chinensisPSS1417866.795450.9653avena_sativa_ot3098cds.AVESA.00001b.r3.5Dg0000323.163.138748.1752
CEY00_Acc14799actinidia_chinensisPSS1417866.409351.1583avena_sativa_ot3098cds.AVESA.00001b.r3.5Ag0000714.160.245246.4098
CEY00_Acc14799actinidia_chinensisPSS1417866.602350.1931avena_sativa_ot3098cds.AVESA.00001b.r3.4Cg0003008.162.274446.9314
CEY00_Acc14799actinidia_chinensisPSS1417845.752933.9768amborella_trichopodaERN0410270.535752.381
CEY00_Acc14799actinidia_chinensisPSS1417869.30558.1081corylus_avellanaCav10g15830.t174.173662.1901
CEY00_Acc14799actinidia_chinensisPSS1417873.16662.1622gossypium_raimondiiKJB2048974.459763.2613
CEY00_Acc14799actinidia_chinensisPSS1417875.096564.2857vitis_viniferaVitvi06g00764_P00175.387664.5349
CEY00_Acc14799actinidia_chinensisPSS1417873.16659.4595ipomoea_trilobaitb04g27580.t173.592259.8058
CEY00_Acc14799actinidia_chinensisPSS1417865.637150.9653triticum_turgidumTRITD4Av1G072560.264.638850.1901
CEY00_Acc14799actinidia_chinensisPSS1417866.023250.5792triticum_turgidumTRITD4Bv1G104730.260.638346.4539
CEY00_Acc14799actinidia_chinensisPSS1417865.830150.1931eragrostis_curvulaTVU4713364.952449.5238
CEY00_Acc14799actinidia_chinensisPSS1417864.285750.9653oryza_glumipatulaOGLUM03G17050.164.534951.1628
CEY00_Acc14799actinidia_chinensisPSS1417866.795456.3707prunus_aviumPav_sc0000375.1_g330.1.mk:mrna73.77462.2601
CEY00_Acc14799actinidia_chinensisPSS1417872.779960.6178coffea_canephoraCDP0407070.074358.3643
CEY00_Acc14799actinidia_chinensisPSS1417867.374551.3514brachypodium_distachyonKQK2177966.858250.9579
CEY00_Acc14799actinidia_chinensisPSS1417865.637151.1583arabis_alpinaKFK2451567.729152.7888
CEY00_Acc14799actinidia_chinensisPSS1417876.83465.6371fraxinus_excelsiorFRAEX38873_v2_000102240.2.cds76.685965.5106
CEY00_Acc14799actinidia_chinensisPSS1417864.478850.5792oryza_meridionalisOMERI03G14900.164.107550.2879
CEY00_Acc14799actinidia_chinensisPSS1417864.478850.9653oryza_indicaBGIOSGA010777-PA46.260436.5651
CEY00_Acc14799actinidia_chinensisPSS1417876.061863.1274pistacia_veracds-EVM0002976.175.769262.8846
CEY00_Acc14799actinidia_chinensisPSS1417873.745261.39quercus_subercds-POE84706.175.494162.8458
CEY00_Acc14799actinidia_chinensisPSS1417873.359162.9344juglans_regiacds.Jr14_07910_p173.50163.0561
CEY00_Acc14799actinidia_chinensisPSS1417825.096522.5869juglans_regiacds.Jr05_06610_p173.863666.4773
CEY00_Acc14799actinidia_chinensisPSS1417866.602352.3166arabidopsis_hallerig24227.t168.452453.7698
CEY00_Acc14799actinidia_chinensisPSS1417866.216252.3166eutrema_salsugineumESQ5158566.992252.9297
CEY00_Acc14799actinidia_chinensisPSS1417864.092750.7722chenopodium_quinoaAUR62036228-RA:cds70.33955.7203
CEY00_Acc14799actinidia_chinensisPSS1417869.11254.0541chenopodium_quinoaAUR62009718-RA:cds65.9351.5654
CEY00_Acc14799actinidia_chinensisPSS1417871.428658.3012eucalyptus_grandisKCW5380769.943357.0888
CEY00_Acc14799actinidia_chinensisPSS1417872.200858.6873rosa_chinensisPRQ3472373.046959.375
CEY00_Acc14799actinidia_chinensisPSS1417864.478850.9653oryza_sativaOs03t0338600-0164.728751.1628
CEY00_Acc14799actinidia_chinensisPSS1417866.602351.3514leersia_perrieriLPERR03G14570.166.602351.3514
CEY00_Acc14799actinidia_chinensisPSS1417864.478850.9653oryza_barthiiOBART03G16660.164.728751.1628
CEY00_Acc14799actinidia_chinensisPSS1417846.525131.8533selaginella_moellendorffiiEFJ2654856.308438.5514
CEY00_Acc14799actinidia_chinensisPSS1417846.525133.3977selaginella_moellendorffiiEFJ1568155.148739.5881
CEY00_Acc14799actinidia_chinensisPSS1417845.366833.0116selaginella_moellendorffiiEFJ3823858.312742.4318
CEY00_Acc14799actinidia_chinensisPSS1417855.212444.5946daucus_carotaKZN0396562.995650.8811
CEY00_Acc14799actinidia_chinensisPSS1417867.181551.9305kalanchoe_fedtschenkoiKaladp0075s0066.1.v1.167.968852.5391
CEY00_Acc14799actinidia_chinensisPSS1417839.961423.7452cyanidioschyzon_merolaeCMH251CT26.778815.912
CEY00_Acc14799actinidia_chinensisPSS1417861.003946.139saccharum_spontaneumSspon.01G0009230-1A-mRNA-1:cds71.011253.7079
CEY00_Acc14799actinidia_chinensisPSS1417847.104233.9768saccharum_spontaneumSspon.01G0009230-1P-mRNA-1:cds61.152944.1103
CEY00_Acc14799actinidia_chinensisPSS1417865.830150.9653triticum_dicoccoidesTRIDC4AG019080.364.828950.1901
CEY00_Acc14799actinidia_chinensisPSS1417865.637150triticum_dicoccoidesTRIDC4BG030570.561.818247.0909
CEY00_Acc14799actinidia_chinensisPSS1417844.401528.9575ostreococcus_lucimarinusABO9994241.366926.9784
CEY00_Acc14799actinidia_chinensisPSS1417871.235557.3359corymbia_citriodoracds-KAF8011669.169.491555.9322
CEY00_Acc14799actinidia_chinensisPSS1417866.216251.1583echinochloa_crusgalliscaffold74.312.cds65.209150.3802
CEY00_Acc14799actinidia_chinensisPSS1417866.216251.3514echinochloa_crusgalliscaffold18.495.cds65.333350.6667
CEY00_Acc14799actinidia_chinensisPSS1417866.795451.7375echinochloa_crusgalliscaffold22.502.cds65.654650.8539
CEY00_Acc14799actinidia_chinensisPSS1417865.057949.8069eragrostis_tefEt_4B_036738.CDS64.559449.4253
CEY00_Acc14799actinidia_chinensisPSS1417854.054141.5058eragrostis_tefEt_4A_032550.CDS62.360847.8842
CEY00_Acc14799actinidia_chinensisPSS1417866.023250.9653digitaria_exilisDexi9B01G0035130.1:cds66.150951.0638
CEY00_Acc14799actinidia_chinensisPSS1417865.44450.7722digitaria_exilisDexi9A01G0036450.1:cds62.201848.2569
CEY00_Acc14799actinidia_chinensisPSS1417865.637151.7375camelina_sativaCsa16g014570.166.666752.549
CEY00_Acc14799actinidia_chinensisPSS1417846.911235.1351camelina_sativaCsa07g012850.165.498649.0566
CEY00_Acc14799actinidia_chinensisPSS1417852.316641.3127camelina_sativaCsa05g032180.168.956754.4529
CEY00_Acc14799actinidia_chinensisPSS1417865.637152.1236camelina_sativaCsa05g033420.167.460353.5714
CEY00_Acc14799actinidia_chinensisPSS1417844.980726.2548galdieria_sulphurariaEME3074436.349521.2168
CEY00_Acc14799actinidia_chinensisPSS1417868.725956.1776corchorus_capsularisOMO8297672.357759.1463
CEY00_Acc14799actinidia_chinensisPSS1417873.938261.39quercus_lobataQL01p025515:mrna70.664258.6716
CEY00_Acc14799actinidia_chinensisPSS1417866.216252.7027arabidopsis_lyratafgenesh2_kg.4__1003__AT2G30320.167.652953.8462
CEY00_Acc14799actinidia_chinensisPSS1417848.841740.3475citrus_clementinaESR4521866.578955
CEY00_Acc14799actinidia_chinensisPSS1417866.023250.7722brassica_rapa_ro18A03g502070.1_BraROA.167.992152.2863
CEY00_Acc14799actinidia_chinensisPSS1417865.25150.5792panicum_halliiPUZ4118565.25150.5792
CEY00_Acc14799actinidia_chinensisPSS1417865.44450.7722hordeum_vulgareHORVU.MOREX.r3.4HG0378050.165.192350.5769
CEY00_Acc14799actinidia_chinensisPSS1417875.868764.8649olea_europaeaOE9A051038C173.595562.9213
CEY00_Acc14799actinidia_chinensisPSS1417862.162247.4903aegilops_tauschiiAET4Gv20447600.1769.546453.1317
CEY00_Acc14799actinidia_chinensisPSS1417865.637150.3861brassica_oleraceaBo3g024490.168.410552.5151
CEY00_Acc14799actinidia_chinensisPSS1417866.409353.0888nymphaea_colorataNC2G0288010.1:cds54.344443.4439
CEY00_Acc14799actinidia_chinensisPSS1417870.270359.2664musa_acuminataMa06_p34260.169.731858.8123
CEY00_Acc14799actinidia_chinensisPSS1417863.706652.5097vigna_angularisKOM4718969.767457.5053
CEY00_Acc14799actinidia_chinensisPSS1417855.598545.3668vigna_angularisKOM4719063.296751.6483
CEY00_Acc14799actinidia_chinensisPSS1417874.131361.7761theobroma_cacaoEOY3465975.739663.1164
CEY00_Acc14799actinidia_chinensisPSS1417864.478850.9653oryza_nivaraONIVA03G17690.164.728751.1628
CEY00_Acc14799actinidia_chinensisPSS1417857.72244.5946trifolium_pratenseTp57577_TGAC_v2_mRNA2828572.397155.9322
CEY00_Acc14799actinidia_chinensisPSS1417868.725954.8263trifolium_pratenseTp57577_TGAC_v2_mRNA2828870.634956.3492
CEY00_Acc14799actinidia_chinensisPSS1417868.339854.8263dioscorea_rotundataDRNTG_04013.368.339854.8263

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression