Description

Ensembl ID CEY00_Acc12971 Gene ID Accession -
Symbol Alias - Full Name Replication protein A DNA-binding subunit A like
Status Confidence Length 3489 bases Strand Plus strand
Position LG12 : 796818 - 800306 RNA binding domain tRNA_anti-codon
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
PSS15480 tRNA_anti-codon PF01336 6.3e-11 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- PSS15480 2146 626aa PSS15480

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
CEY00_Acc12971actinidia_chinensisPSR9137156.888443.943actinidia_chinensisPSS1548076.517659.1054
CEY00_Acc12971actinidia_chinensisPSS0130255.402342.4138actinidia_chinensisPSS1548076.996858.9457
CEY00_Acc12971actinidia_chinensisPSR8911753.993632.5879actinidia_chinensisPSS1548053.993632.5879
CEY00_Acc12971actinidia_chinensisPSS0798454.153433.0671actinidia_chinensisPSS1548054.153433.0671

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
CEY00_Acc12971actinidia_chinensisPSS1548048.242829.0735chondrus_crispusCDF3253946.533128.0431
CEY00_Acc12971actinidia_chinensisPSS1548055.271637.5399chlamydomonas_reinhardtiiPNW7041536.382824.7108
CEY00_Acc12971actinidia_chinensisPSS1548035.942527.9553papaver_somniferumRZC7137462.548.6111
CEY00_Acc12971actinidia_chinensisPSS1548084.824371.4058papaver_somniferumRZC5261585.645272.0968
CEY00_Acc12971actinidia_chinensisPSS1548087.380277.7955ficus_caricaFCD_00010685-RA:cds87.942178.2958
CEY00_Acc12971actinidia_chinensisPSS1548088.817979.393cannabis_sativa_femalecds.evm.model.02.139989.53380.0322
CEY00_Acc12971actinidia_chinensisPSS1548087.380277.3163beta_vulgarisKMS9523086.963476.9475
CEY00_Acc12971actinidia_chinensisPSS1548088.178976.5176citrullus_lanatusCla97C11G207910.188.74677.0096
CEY00_Acc12971actinidia_chinensisPSS1548089.137476.6773cucumis_sativusKGN6051689.566677.0465
CEY00_Acc12971actinidia_chinensisPSS1548086.90174.2812arabidopsis_thalianaAT2G06510.18572.6562
CEY00_Acc12971actinidia_chinensisPSS1548088.977677.9553populus_trichocarpaPotri.018G065300.1.v4.183.134372.8358
CEY00_Acc12971actinidia_chinensisPSS1548084.34571.885brassica_junceacds.BjuA07g05350S84.210571.7703
CEY00_Acc12971actinidia_chinensisPSS1548084.34571.885brassica_napusCDY3341083.544371.2025
CEY00_Acc12971actinidia_chinensisPSS1548084.34571.885brassica_napusCDY6504684.210571.7703
CEY00_Acc12971actinidia_chinensisPSS1548077.156557.6677marchantia_polymorphaPTQ3037254.761940.9297
CEY00_Acc12971actinidia_chinensisPSS1548086.90173.9617prunus_dulcisVVA1026583.435671.0123
CEY00_Acc12971actinidia_chinensisPSS1548086.741273.6422malus_domestica_goldenmRNA:MD02G007350084.055771.3622
CEY00_Acc12971actinidia_chinensisPSS1548085.463373.6422malus_domestica_goldenmRNA:MD15G018780082.945771.4729
CEY00_Acc12971actinidia_chinensisPSS1548086.90173.8019prunus_persicaONH9763683.435670.8589
CEY00_Acc12971actinidia_chinensisPSS1548086.26275.5591cajanus_cajanC.cajan_04042.t81.942371.7754
CEY00_Acc12971actinidia_chinensisPSS1548081.948971.246cajanus_cajanC.cajan_38604.t89.528877.836
CEY00_Acc12971actinidia_chinensisPSS1548088.178974.6006medicago_truncatulaKEH3754888.038374.4817
CEY00_Acc12971actinidia_chinensisPSS1548073.642257.0288medicago_truncatulaAES7009955.946643.3252
CEY00_Acc12971actinidia_chinensisPSS1548087.380273.6422pisum_sativumPsat1g132720.1.cds85.871372.3705
CEY00_Acc12971actinidia_chinensisPSS1548086.102273.3227glycine_maxKRH1248684.615472.0565
CEY00_Acc12971actinidia_chinensisPSS1548056.549548.5623glycine_maxKRH3745882.90471.1944
CEY00_Acc12971actinidia_chinensisPSS1548087.539974.6006phaseolus_vulgarisESW1067086.846374.0095
CEY00_Acc12971actinidia_chinensisPSS1548083.067170.9265vigna_radiataVradi05g02130.183.271.04
CEY00_Acc12971actinidia_chinensisPSS1548088.019278.754capsicum_annuumPHT8173286.093877.0312
CEY00_Acc12971actinidia_chinensisPSS1548088.498478.4345manihot_esculentaOAY5397882.934173.503
CEY00_Acc12971actinidia_chinensisPSS1548087.220475.0799vigna_unguiculataVigun09g037100.1.v1.286.119974.1325
CEY00_Acc12971actinidia_chinensisPSS1548075.399468.0511sesamum_indicumSIN_1024704.t.cds186.288877.8793
CEY00_Acc12971actinidia_chinensisPSS1548085.463375.7188helianthus_annuusmRNA:HanXRQr2_Chr10g046591186.429776.5751
CEY00_Acc12971actinidia_chinensisPSS1548087.380279.2332solanum_lycopersicumSolyc05g025590.3.186.006377.9874
CEY00_Acc12971actinidia_chinensisPSS1548073.801960.2236oryza_longistaminataKN539071.1_FGP0097762.8333
CEY00_Acc12971actinidia_chinensisPSS1548078.274863.2588oryza_brachyanthaOB02G41360.175.038360.6432
CEY00_Acc12971actinidia_chinensisPSS1548075.559157.9872avena_sativa_sangAVESA.00010b.r2.6DG1157700.1.CDS72.54655.6748
CEY00_Acc12971actinidia_chinensisPSS1548075.878657.8275avena_sativa_sangAVESA.00010b.r2.6AG1042570.1.CDS72.852855.5215
CEY00_Acc12971actinidia_chinensisPSS1548075.718857.8275avena_sativa_sangAVESA.00010b.r2.6CG1133440.1.CDS72.588155.4364
CEY00_Acc12971actinidia_chinensisPSS1548075.399457.8275lolium_perennecds.KYUSt_chr6.532772.281855.4364
CEY00_Acc12971actinidia_chinensisPSS1548069.808358.147oryza_glaberrimaORGLA02G0298700.177.75864.7687
CEY00_Acc12971actinidia_chinensisPSS1548078.434563.099setaria_italicaKQL3174775.191460.49
CEY00_Acc12971actinidia_chinensisPSS1548074.440957.3482secale_cerealeSECCE6Rv1G0413000.171.253854.893
CEY00_Acc12971actinidia_chinensisPSS1548080.191764.5367oryza_punctataOPUNC02G31890.176.758461.7737
CEY00_Acc12971actinidia_chinensisPSS1548079.233263.738oryza_rufipogonORUFI02G36050.175.609860.8232
CEY00_Acc12971actinidia_chinensisPSS1548078.594263.4185setaria_viridisTKW4185775.344660.7963
CEY00_Acc12971actinidia_chinensisPSS1548074.760457.3482triticum_urartuTuG1812G0600003590.01.T0171.559654.893
CEY00_Acc12971actinidia_chinensisPSS1548075.399458.3067physcomitrium_patensPp3c23_16880V3.254.692942.2943
CEY00_Acc12971actinidia_chinensisPSS1548075.878657.8275physcomitrium_patensPp3c20_10450V3.153.672340.904
CEY00_Acc12971actinidia_chinensisPSS1548074.600657.3482triticum_aestivumTraesCS6D02G315400.171.406754.893
CEY00_Acc12971actinidia_chinensisPSS1548074.281257.6677triticum_aestivumTraesCS6B02G366400.171.31955.3681
CEY00_Acc12971actinidia_chinensisPSS1548074.600657.1885triticum_aestivumTraesCS6A02G335700.171.406754.7401
CEY00_Acc12971actinidia_chinensisPSS1548077.316362.9393sorghum_bicolorEES0762574.233160.4294
CEY00_Acc12971actinidia_chinensisPSS1548077.156562.9393zea_maysZm00001eb193190_P00173.628160.061
CEY00_Acc12971actinidia_chinensisPSS1548020.287515.1757asparagus_officinalisONK6225144.876333.5689
CEY00_Acc12971actinidia_chinensisPSS1548022.044711.0224caenorhabditis_elegansR03H10.7.138.440119.2201
CEY00_Acc12971actinidia_chinensisPSS1548020.447311.5016caenorhabditis_elegansR03H10.6.139.506222.2222
CEY00_Acc12971actinidia_chinensisPSS1548045.846625.0799caenorhabditis_elegansF18A1.5.143.816823.9695
CEY00_Acc12971actinidia_chinensisPSS1548075.718857.8275avena_sativa_ot3098cds.AVESA.00001b.r3.6Cg0000793.168.795452.5399
CEY00_Acc12971actinidia_chinensisPSS1548075.878657.8275avena_sativa_ot3098cds.AVESA.00001b.r3.6Ag0001783.168.940552.5399
CEY00_Acc12971actinidia_chinensisPSS1548075.559157.9872avena_sativa_ot3098cds.AVESA.00001b.r3.6Dg0001474.167.378951.7094
CEY00_Acc12971actinidia_chinensisPSS1548049.201331.7891drosophila_melanogasterFBpp008135651.077933.0017
CEY00_Acc12971actinidia_chinensisPSS1548051.757233.0671homo_sapiensENSP0000025471952.597433.6039
CEY00_Acc12971actinidia_chinensisPSS1548079.552764.377amborella_trichopodaERN1121078.67363.6651
CEY00_Acc12971actinidia_chinensisPSS1548090.255680.9904corylus_avellanaCav11g15380.t190.544981.25
CEY00_Acc12971actinidia_chinensisPSS1548087.699777.7955gossypium_raimondiiKJB8302187.281477.4245
CEY00_Acc12971actinidia_chinensisPSS1548089.297182.2684vitis_viniferaVitvi11g00104_P00189.871482.7974
CEY00_Acc12971actinidia_chinensisPSS1548088.977680.1917ipomoea_trilobaitb12g21030.t186.760178.1931
CEY00_Acc12971actinidia_chinensisPSS1548074.600657.1885triticum_turgidumTRITD6Av1G201000.171.406754.7401
CEY00_Acc12971actinidia_chinensisPSS1548074.281257.6677triticum_turgidumTRITD6Bv1G196160.171.31955.3681
CEY00_Acc12971actinidia_chinensisPSS1548077.156561.3419eragrostis_curvulaTVU2876773.740558.626
CEY00_Acc12971actinidia_chinensisPSS1548079.233263.738oryza_glumipatulaOGLUM02G35680.173.809559.375
CEY00_Acc12971actinidia_chinensisPSS1548085.303572.524prunus_aviumPav_sc0000129.1_g680.1.mk:mrna83.437570.9375
CEY00_Acc12971actinidia_chinensisPSS1548090.255680.3514coffea_canephoraCDP0310784.834875.5255
CEY00_Acc12971actinidia_chinensisPSS1548072.683756.869brachypodium_distachyonKQK2291272.683756.869
CEY00_Acc12971actinidia_chinensisPSS1548074.920158.3067brachypodium_distachyonKQK0164474.681558.121
CEY00_Acc12971actinidia_chinensisPSS1548087.380276.3578arabis_alpinaKFK3989284.937974.2236
CEY00_Acc12971actinidia_chinensisPSS1548085.303576.6773fraxinus_excelsiorFRAEX38873_v2_000317270.2.cds85.852177.1704
CEY00_Acc12971actinidia_chinensisPSS1548079.073563.5783oryza_meridionalisOMERI02G32790.169.915356.2147
CEY00_Acc12971actinidia_chinensisPSS1548078.913763.5783oryza_indicaBGIOSGA005499-PA75.07660.4863
CEY00_Acc12971actinidia_chinensisPSS1548075.399467.0927pistacia_veracds-EVM0010936.182.2373.1707
CEY00_Acc12971actinidia_chinensisPSS1548089.137479.2332quercus_subercds-POF11021.189.2879.36
CEY00_Acc12971actinidia_chinensisPSS1548087.060778.2748cynara_cardunculusKVH9403686.507977.7778
CEY00_Acc12971actinidia_chinensisPSS1548088.817979.8722juglans_regiacds.Jr01_25850_p189.245680.2568
CEY00_Acc12971actinidia_chinensisPSS1548087.539974.7604arabidopsis_hallerig18478.t185.62573.125
CEY00_Acc12971actinidia_chinensisPSS1548086.90174.2812eutrema_salsugineumESQ5043684.735272.4299
CEY00_Acc12971actinidia_chinensisPSS1548025.239616.1342chara_brauniiGBG9243557.664236.8613
CEY00_Acc12971actinidia_chinensisPSS1548070.127851.5974chara_brauniiGBG8276247.613935.0325
CEY00_Acc12971actinidia_chinensisPSS1548054.153434.8243chara_brauniiGBG8340532.163220.6831
CEY00_Acc12971actinidia_chinensisPSS1548087.220476.1981chenopodium_quinoaAUR62028992-RA:cds87.640476.565
CEY00_Acc12971actinidia_chinensisPSS1548087.220475.8786chenopodium_quinoaAUR62025182-RA:cds87.640476.244
CEY00_Acc12971actinidia_chinensisPSS1548088.178979.2332eucalyptus_grandisKCW8217086.115477.3791
CEY00_Acc12971actinidia_chinensisPSS1548069.169359.1054rosa_chinensisPRQ4693777.598666.3082
CEY00_Acc12971actinidia_chinensisPSS1548079.233263.738oryza_sativaOs02t0776800-0175.609860.8232
CEY00_Acc12971actinidia_chinensisPSS1548078.75463.2588leersia_perrieriLPERR02G28420.175.497760.6432
CEY00_Acc12971actinidia_chinensisPSS1548078.913763.738oryza_barthiiOBART02G34540.175.304960.8232
CEY00_Acc12971actinidia_chinensisPSS1548074.281255.1118selaginella_moellendorffiiEFJ2876357.055242.3313
CEY00_Acc12971actinidia_chinensisPSS1548071.725253.6741selaginella_moellendorffiiEFJ3071370.597552.8302
CEY00_Acc12971actinidia_chinensisPSS1548085.303573.0032kalanchoe_fedtschenkoiKaladp0011s0041.1.v1.185.576973.2372
CEY00_Acc12971actinidia_chinensisPSS1548046.645429.5527cyanidioschyzon_merolaeCMC123CT44.042227.9035
CEY00_Acc12971actinidia_chinensisPSS1548061.821149.6805saccharum_spontaneumSspon.04G0002350-2D-mRNA-1:cds26.434421.2432
CEY00_Acc12971actinidia_chinensisPSS1548068.849853.5144triticum_dicoccoidesTRIDC6AG050210.273.174956.8761
CEY00_Acc12971actinidia_chinensisPSS1548068.849853.8339triticum_dicoccoidesTRIDC6BG058750.173.174957.2156
CEY00_Acc12971actinidia_chinensisPSS1548053.194933.0671ostreococcus_lucimarinusABO9952251.230831.8462
CEY00_Acc12971actinidia_chinensisPSS1548053.194933.0671ostreococcus_lucimarinusABO9955851.309731.8952
CEY00_Acc12971actinidia_chinensisPSS1548088.019279.5527corymbia_citriodoracds-KAF8023446.186.228577.9343
CEY00_Acc12971actinidia_chinensisPSS1548077.316362.4601echinochloa_crusgalliscaffold118.406.cds74.119459.8775
CEY00_Acc12971actinidia_chinensisPSS1548077.47662.7796echinochloa_crusgalliscaffold223.124.cds55.9445.3287
CEY00_Acc12971actinidia_chinensisPSS1548077.635862.4601echinochloa_crusgalliscaffold174.220.cds74.425759.8775
CEY00_Acc12971actinidia_chinensisPSS1548076.517661.9808eragrostis_tefEt_1A_006588.CDS73.018359.1463
CEY00_Acc12971actinidia_chinensisPSS1548076.198161.8211eragrostis_tefEt_1B_011413.CDS72.824459.084
CEY00_Acc12971actinidia_chinensisPSS1548077.955363.099digitaria_exilisDexi1B01G0027850.1:cds74.617760.3976
CEY00_Acc12971actinidia_chinensisPSS1548078.11562.9393digitaria_exilisDexi1A01G0027660.1:cds74.770660.2446
CEY00_Acc12971actinidia_chinensisPSS1548086.581575.0799camelina_sativaCsa15g059740.176.770566.5722
CEY00_Acc12971actinidia_chinensisPSS1548086.421774.4409camelina_sativaCsa01g038350.140.133534.5697
CEY00_Acc12971actinidia_chinensisPSS1548082.907369.968camelina_sativaCsa19g040850.174.037162.4822
CEY00_Acc12971actinidia_chinensisPSS1548048.72227.9553saccharomyces_cerevisiaeYAR007C49.114328.1804
CEY00_Acc12971actinidia_chinensisPSS1548049.041530.3514galdieria_sulphurariaEME2626847.376529.321
CEY00_Acc12971actinidia_chinensisPSS1548087.699777.6358corchorus_capsularisOMO6721687.420477.3885
CEY00_Acc12971actinidia_chinensisPSS1548088.817979.5527quercus_lobataQL02p061033:mrna88.9679.68
CEY00_Acc12971actinidia_chinensisPSS1548087.539974.9201arabidopsis_lyratascaffold_303391.185.62573.2812
CEY00_Acc12971actinidia_chinensisPSS1548088.019278.5942citrus_clementinaESR6480484.379875.3446
CEY00_Acc12971actinidia_chinensisPSS1548084.34572.2045brassica_rapa_ro18A07p009270.1_BraROA.169.65759.6306
CEY00_Acc12971actinidia_chinensisPSS1548078.274863.099panicum_halliiPUZ7790275.038360.49
CEY00_Acc12971actinidia_chinensisPSS1548075.079958.4665hordeum_vulgareHORVU.MOREX.r3.6HG0620000.171.865455.9633
CEY00_Acc12971actinidia_chinensisPSS1548089.297180.3514olea_europaeaOE9A030541C287.755178.9639
CEY00_Acc12971actinidia_chinensisPSS1548074.440957.3482aegilops_tauschiiAET6Gv20824400.271.253854.893
CEY00_Acc12971actinidia_chinensisPSS1548084.34571.885brassica_oleraceaBo7g026500.183.676771.3154
CEY00_Acc12971actinidia_chinensisPSS1548024.600616.4537nymphaea_colorataNC13G0027710.1:cds45.562130.4734
CEY00_Acc12971actinidia_chinensisPSS1548020.60715.016nymphaea_colorataNC9G0091400.1:cds58.636442.7273
CEY00_Acc12971actinidia_chinensisPSS1548082.108669.6486musa_acuminataMa09_p27980.281.977769.5375
CEY00_Acc12971actinidia_chinensisPSS1548087.380274.7604vigna_angularisKOM3992986.277673.817
CEY00_Acc12971actinidia_chinensisPSS1548088.019277.7955theobroma_cacaoEOY3030987.738977.5478
CEY00_Acc12971actinidia_chinensisPSS1548079.073563.738oryza_nivaraONIVA02G36580.175.22860.6383
CEY00_Acc12971actinidia_chinensisPSS1548037.220430.5112trifolium_pratenseTp57577_TGAC_v2_mRNA3050580.622866.09
CEY00_Acc12971actinidia_chinensisPSS1548054.952146.3259trifolium_pratenseTp57577_TGAC_v2_mRNA1127490.052475.9162

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression