Description

Ensembl ID CEY00_Acc12528 Gene ID Accession -
Symbol Alias - Full Name Pre-mRNA-processing-splicing factor 8A
Status Confidence Length 15008 bases Strand Plus strand
Position LG11 : 11975491 - 11990498 RNA binding domain PROCT , PRP8_domainIV , PRO8NT , U6-snRNA_bdg , PROCN , RRM_4 , U5_2-snRNA_bdg
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
PSS17837 PROCT PF08084 2.9e-51 1
PSS17837 PRP8_domainIV PF12134 4.1e-129 2
PSS17837 PRO8NT PF08082 1.1e-84 3
PSS17837 U6-snRNA_bdg PF10596 7.3e-90 4
PSS17837 PROCN PF08083 7.1e-234 5
PSS17837 RRM_4 PF10598 6.8e-47 6
PSS17837 U5_2-snRNA_bdg PF10597 1.2e-71 7

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- PSS17837 7566 2347aa PSS17837

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
CEY00_Acc12528actinidia_chinensisPSR9602588.844487.5111actinidia_chinensisPSS1783785.172683.8943
CEY00_Acc12528actinidia_chinensisPSR9606899.833998.6711actinidia_chinensisPSS1783725.607225.3089
CEY00_Acc12528actinidia_chinensisPSS0751678.5173.0659actinidia_chinensisPSS1783711.674510.8649

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
CEY00_Acc12528actinidia_chinensisPSS1783784.022268.9391chondrus_crispusCDF3605881.420366.8043
CEY00_Acc12528actinidia_chinensisPSS1783792.501183.8091chlamydomonas_reinhardtiiPNW8813890.533882.0267
CEY00_Acc12528actinidia_chinensisPSS1783713.975313.0379papaver_somniferumRZC5158486.772580.9524
CEY00_Acc12528actinidia_chinensisPSS1783797.869695.3558papaver_somniferumRZC6201597.454494.9512
CEY00_Acc12528actinidia_chinensisPSS1783728.376724.3289papaver_somniferumRZC4998956.440748.3898
CEY00_Acc12528actinidia_chinensisPSS1783797.912295.3984papaver_somniferumRZC5384097.496894.9936
CEY00_Acc12528actinidia_chinensisPSS1783798.764497.1453citrullus_lanatusCla97C09G165170.198.764497.1453
CEY00_Acc12528actinidia_chinensisPSS1783798.80797.1027cucumis_meloMELO3C023427.2.198.80797.1027
CEY00_Acc12528actinidia_chinensisPSS1783798.80797.1027cucumis_sativusKGN4526298.80797.1027
CEY00_Acc12528actinidia_chinensisPSS1783723.221121.6447brassica_napusCDX9149993.162486.8376
CEY00_Acc12528actinidia_chinensisPSS1783797.400993.8645marchantia_polymorphaPTQ4456697.070193.5456
CEY00_Acc12528actinidia_chinensisPSS1783798.253196.5914capsicum_annuumPHT7577697.587895.9374
CEY00_Acc12528actinidia_chinensisPSS1783798.466196.634solanum_tuberosumPGSC0003DMT40007394796.73594.9351
CEY00_Acc12528actinidia_chinensisPSS1783798.593996.5914sesamum_indicumSIN_1009631.t97.226995.2521
CEY00_Acc12528actinidia_chinensisPSS1783798.466196.7618solanum_lycopersicumSolyc07g008880.3.196.937995.2601
CEY00_Acc12528actinidia_chinensisPSS178372.684282.34342oryza_longistaminataAMDW01021966.1_FGP00186.301475.3425
CEY00_Acc12528actinidia_chinensisPSS178378.777168.69195oryza_longistaminataAMDW01038331.1_FGP00199.038598.0769
CEY00_Acc12528actinidia_chinensisPSS1783795.398492.288oryza_longistaminataKN538867.1_FGP02088.253885.3764
CEY00_Acc12528actinidia_chinensisPSS1783795.270692.3306oryza_longistaminataKN540011.1_FGP00598.156395.1273
CEY00_Acc12528actinidia_chinensisPSS1783795.313292.075oryza_brachyanthaOB06G14120.198.200294.8639
CEY00_Acc12528actinidia_chinensisPSS1783797.273194.3332avena_sativa_sangAVESA.00010b.r2.5AG0794180.1.CDS96.778393.8533
CEY00_Acc12528actinidia_chinensisPSS1783744.567542.7354avena_sativa_sangAVESA.00010b.r2.7DG1340470.1.CDS94.319290.4418
CEY00_Acc12528actinidia_chinensisPSS1783787.132584.5334avena_sativa_sangAVESA.00010b.r2.1DG0131270.1.CDS96.280693.4087
CEY00_Acc12528actinidia_chinensisPSS1783797.187994.3758avena_sativa_sangAVESA.00010b.r2.5CG0868840.1.CDS96.652593.8559
CEY00_Acc12528actinidia_chinensisPSS1783797.187994.461avena_sativa_sangAVESA.00010b.r2.7AG1204950.1.CDS96.652593.9407
CEY00_Acc12528actinidia_chinensisPSS1783797.273194.3758avena_sativa_sangAVESA.00010b.r2.4CG1278970.1.CDS96.778393.8957
CEY00_Acc12528actinidia_chinensisPSS1783797.187994.248lolium_perennecds.KYUSt_chr4.4947096.734593.8083
CEY00_Acc12528actinidia_chinensisPSS1783796.804493.9923lolium_perennecds.KYUSt_chr7.3680595.824593.0409
CEY00_Acc12528actinidia_chinensisPSS1783797.145394.0775oryza_glaberrimaORGLA06G0041600.197.021393.9574
CEY00_Acc12528actinidia_chinensisPSS1783796.63493.481oryza_glaberrimaORGLA05G0040900.196.510693.3617
CEY00_Acc12528actinidia_chinensisPSS1783796.932393.7793setaria_italicaKQL0958996.767393.6197
CEY00_Acc12528actinidia_chinensisPSS1783797.145394.0349oryza_punctataOPUNC06G04280.195.758192.6921
CEY00_Acc12528actinidia_chinensisPSS1783797.273193.9071oryza_punctataOPUNC05G04030.191.982388.7994
CEY00_Acc12528actinidia_chinensisPSS1783797.145394.0775oryza_rufipogonORUFI06G04460.195.798392.7731
CEY00_Acc12528actinidia_chinensisPSS1783797.060193.8219oryza_rufipogonORUFI05G04600.196.977493.742
CEY00_Acc12528actinidia_chinensisPSS1783797.060193.9071setaria_viridisTKW2002396.402993.2713
CEY00_Acc12528actinidia_chinensisPSS1783797.145393.4384physcomitrium_patensPp3c24_20910V3.197.686493.9589
CEY00_Acc12528actinidia_chinensisPSS1783797.187993.3958physcomitrium_patensPp3c8_25090V3.397.687493.8758
CEY00_Acc12528actinidia_chinensisPSS1783798.253196.1227ananas_comosusAco011503.1.mrna197.053994.9495
CEY00_Acc12528actinidia_chinensisPSS178374.132943.79207triticum_aestivumTraesCS1B02G415700.183.620776.7241
CEY00_Acc12528actinidia_chinensisPSS178373.834683.62164triticum_aestivumTraesCS1B02G416400.184.112279.4393
CEY00_Acc12528actinidia_chinensisPSS1783797.145394.3758triticum_aestivumTraesCS5B02G193600.196.692193.9355
CEY00_Acc12528actinidia_chinensisPSS1783796.889694.2906triticum_aestivumTraesCS7B02G029700.196.152293.5729
CEY00_Acc12528actinidia_chinensisPSS1783797.230594.4184triticum_aestivumTraesCS5A02G189600.196.735993.9381
CEY00_Acc12528actinidia_chinensisPSS1783796.932394.3332triticum_aestivumTraesCS7A02G129700.196.316793.7341
CEY00_Acc12528actinidia_chinensisPSS178373.962513.70686triticum_aestivumTraesCS1B02G368800.185.321179.8165
CEY00_Acc12528actinidia_chinensisPSS1783797.102794.0775sorghum_bicolorOQU7590096.445293.4405
CEY00_Acc12528actinidia_chinensisPSS1783789.68979.5058caenorhabditis_elegansC50C3.6.190.382180.1202
CEY00_Acc12528actinidia_chinensisPSS1783796.548893.8645avena_sativa_ot3098cds.AVESA.00001b.r3.7Ag0000863.397.462494.7527
CEY00_Acc12528actinidia_chinensisPSS1783797.187994.248avena_sativa_ot3098cds.AVESA.00001b.r3.1Dg0003205.196.042193.1368
CEY00_Acc12528actinidia_chinensisPSS1783797.187994.3758avena_sativa_ot3098cds.AVESA.00001b.r3.5Cg0003081.196.652593.8559
CEY00_Acc12528actinidia_chinensisPSS1783758.41556.6681avena_sativa_ot3098cds.AVESA.00001b.r3.7Dg0003271.198.138995.204
CEY00_Acc12528actinidia_chinensisPSS1783797.273194.3758avena_sativa_ot3098cds.AVESA.00001b.r3.4Cg0001321.196.045493.1847
CEY00_Acc12528actinidia_chinensisPSS1783791.265481.7213drosophila_melanogasterFBpp008712489.39980.0501
CEY00_Acc12528actinidia_chinensisPSS1783791.308182.1474homo_sapiensENSP0000030435091.777382.5696
CEY00_Acc12528actinidia_chinensisPSS1783798.082795.7392amborella_trichopodaERN1797098.040995.6985
CEY00_Acc12528actinidia_chinensisPSS1783798.338396.4636ipomoea_trilobaitb10g15310.t197.301995.4469
CEY00_Acc12528actinidia_chinensisPSS1783797.187994.1202eragrostis_curvulaTVU1238696.652593.6017
CEY00_Acc12528actinidia_chinensisPSS1783795.270692.3306oryza_glumipatulaOGLUM06G04590.196.880493.8908
CEY00_Acc12528actinidia_chinensisPSS1783796.548893.481oryza_glumipatulaOGLUM05G04320.196.1893.1239
CEY00_Acc12528actinidia_chinensisPSS1783798.679297.3583coffea_canephoraCDP1929697.556996.2511
CEY00_Acc12528actinidia_chinensisPSS1783798.040195.8245coffea_canephoraCDP1676796.884294.6947
CEY00_Acc12528actinidia_chinensisPSS1783797.145394.2906brachypodium_distachyonKQK1943796.733193.8905
CEY00_Acc12528actinidia_chinensisPSS1783796.84793.6515oryza_meridionalisOMERI05G04370.296.641293.4524
CEY00_Acc12528actinidia_chinensisPSS1783790.967287.9847oryza_indicaBGIOSGA021833-PA96.825493.6508
CEY00_Acc12528actinidia_chinensisPSS1783795.22892.2028oryza_indicaBGIOSGA018755-PA98.112494.9956
CEY00_Acc12528actinidia_chinensisPSS1783790.285580.6988ciona_savignyiENSCSAVP0000001333285.650876.5562
CEY00_Acc12528actinidia_chinensisPSS178377.711976.39114eutrema_salsugineumESQ5568583.796369.4444
CEY00_Acc12528actinidia_chinensisPSS1783795.142789.2629chara_brauniiGBG6491295.305289.4153
CEY00_Acc12528actinidia_chinensisPSS1783798.551396.9749nicotiana_attenuataOIT2674896.576295.0313
CEY00_Acc12528actinidia_chinensisPSS1783798.380996.634nicotiana_attenuataOIS9700696.409294.6973
CEY00_Acc12528actinidia_chinensisPSS1783786.791685.5134eucalyptus_grandisKCW7071498.453497.0034
CEY00_Acc12528actinidia_chinensisPSS1783797.699294.7167eucalyptus_grandisKCW7077597.53394.5555
CEY00_Acc12528actinidia_chinensisPSS1783721.474220.196oryza_sativaOs05t0163250-0190.322684.9462
CEY00_Acc12528actinidia_chinensisPSS1783747.251845.6327oryza_sativaOs06t0167000-0298.141694.7788
CEY00_Acc12528actinidia_chinensisPSS1783795.185392.1602leersia_perrieriLPERR09G12590.198.154795.0351
CEY00_Acc12528actinidia_chinensisPSS1783797.187994.1202leersia_perrieriLPERR06G04030.195.679592.6594
CEY00_Acc12528actinidia_chinensisPSS1783795.185392.1176oryza_barthiiOBART05G04400.198.154794.9912
CEY00_Acc12528actinidia_chinensisPSS1783795.270692.288oryza_barthiiOBART06G04500.196.880493.8475
CEY00_Acc12528actinidia_chinensisPSS1783796.804493.5236selaginella_moellendorffiiEFJ2528595.986592.7334
CEY00_Acc12528actinidia_chinensisPSS1783798.977497.1879daucus_carotaKZM8844098.016996.2447
CEY00_Acc12528actinidia_chinensisPSS1783794.46190.2003daucus_carotaKZM9032496.265791.9236
CEY00_Acc12528actinidia_chinensisPSS1783798.80797.0601kalanchoe_fedtschenkoiKaladp0037s0356.1.v1.198.764997.0187
CEY00_Acc12528actinidia_chinensisPSS1783773.838972.7311kalanchoe_fedtschenkoiKaladp0036s0144.1.v1.199.255497.7663
CEY00_Acc12528actinidia_chinensisPSS1783750.149133.1913cyanidioschyzon_merolaeCMH168CT49.144132.5261
CEY00_Acc12528actinidia_chinensisPSS1783711.29110.8223saccharum_spontaneumSspon.08G0013830-2B-mRNA-1:cds94.642990.7143
CEY00_Acc12528actinidia_chinensisPSS178376.433756.26331triticum_dicoccoidesTRIDC3BG009460.388.823586.4706
CEY00_Acc12528actinidia_chinensisPSS1783796.122793.481triticum_dicoccoidesTRIDC5BG033280.197.916795.2257
CEY00_Acc12528actinidia_chinensisPSS178373.91993.53643triticum_dicoccoidesTRIDC1BG065700.282.882974.7748
CEY00_Acc12528actinidia_chinensisPSS178373.536433.28078triticum_dicoccoidesTRIDC1BG065780.38377
CEY00_Acc12528actinidia_chinensisPSS1783796.122793.5663triticum_dicoccoidesTRIDC7BG004510.297.493594.9006
CEY00_Acc12528actinidia_chinensisPSS1783791.393383.2126ostreococcus_lucimarinusABO9869492.456984.181
CEY00_Acc12528actinidia_chinensisPSS1783798.80797.1027corymbia_citriodoracds-KAF8025372.198.638996.9375
CEY00_Acc12528actinidia_chinensisPSS1783787.899485.0873corymbia_citriodoracds-KAF8041762.198.051394.9145
CEY00_Acc12528actinidia_chinensisPSS1783797.102794.2906echinochloa_crusgalliscaffold10.380.cds96.445293.6521
CEY00_Acc12528actinidia_chinensisPSS1783797.060194.1202echinochloa_crusgalliscaffold367.55.cds96.443793.5224
CEY00_Acc12528actinidia_chinensisPSS1783797.102794.1628echinochloa_crusgalliscaffold34.383.cds96.445293.5252
CEY00_Acc12528actinidia_chinensisPSS1783796.250593.2254eragrostis_tefEt_2B_020945.CDS96.497293.4643
CEY00_Acc12528actinidia_chinensisPSS178376.604185.92245eragrostis_tefEt_2B_022554.CDS86.111177.2222
CEY00_Acc12528actinidia_chinensisPSS1783794.24891.2654eragrostis_tefEt_2A_016995.CDS96.636193.578
CEY00_Acc12528actinidia_chinensisPSS1783797.017594.2054digitaria_exilisDexi4B01G0005870.1:cds95.914193.1339
CEY00_Acc12528actinidia_chinensisPSS1783796.974994.1628digitaria_exilisDexi4A01G0005040.1:cds96.318293.5252
CEY00_Acc12528actinidia_chinensisPSS1783779.889271.5807camelina_sativaCsa10g001500.160.856954.5278
CEY00_Acc12528actinidia_chinensisPSS1783777.545861.781saccharomyces_cerevisiaeYHR165C75.424860.0912
CEY00_Acc12528actinidia_chinensisPSS1783788.112576.5658galdieria_sulphurariaEME3029187.478976.0152
CEY00_Acc12528actinidia_chinensisPSS1783797.017594.0349panicum_halliiPUZ6203096.360693.3982
CEY00_Acc12528actinidia_chinensisPSS1783797.017594.3758hordeum_vulgareHORVU.MOREX.r3.7HG0656060.196.48393.8559
CEY00_Acc12528actinidia_chinensisPSS1783797.145394.4184hordeum_vulgareHORVU.MOREX.r3.5HG0476410.196.774294.0577
CEY00_Acc12528actinidia_chinensisPSS1783798.210596.1653nymphaea_colorataNC3G0224200.1:cds98.168796.1244
CEY00_Acc12528actinidia_chinensisPSS1783797.230594.0775oryza_nivaraONIVA01G08250.386.768183.9544
CEY00_Acc12528actinidia_chinensisPSS1783781.124877.8867oryza_nivaraONIVA05G04750.195.919492.0907
CEY00_Acc12528actinidia_chinensisPSS1783794.929793.0976dioscorea_rotundataDRNTG_32049.197.462895.5818

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression