RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	CCACVL1_09661	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Pseudouridine synthase, RsuA/RluB/C/D/E/F
Status	Confidence	Length	1593 bases	Strand	Minus strand
Position	contig09510 : 34074 - 35666	RNA binding domain	PseudoU_synth_2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
OMO86264	PseudoU_synth_2	PF00849	8e-25	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	OMO86264	942	313aa	OMO86264

Gene Model

Click here to download CCACVL1_09661's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download CCACVL1_09661's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
CCACVL1_09661

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
CCACVL1_09661

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression