RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	CCACVL1_04308	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Mitochodrial transcription termination factor-related protein
Status	Confidence	Length	2591 bases	Strand	Plus strand
Position	contig07153 : 9938 - 12528	RNA binding domain	mTERF
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
OMO98186	mTERF	PF02536	1.3e-28	1
OMO98186	mTERF	PF02536	1.3e-28	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	OMO98186	879	292aa	OMO98186

Gene Model

Click here to download CCACVL1_04308's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download CCACVL1_04308's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
CCACVL1_04308

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
CCACVL1_04308

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression