RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	C5167_034099	Gene ID		Accession	-
Symbol		Alias	-	Full Name	hypothetical protein
Status	Confidence	Length	9338 bases	Strand	Plus strand
Position	7 : 130350024 - 130359361	RNA binding domain	tRNA_synt_1c_R1 , tRNA-synt_1c , tRNA-synt_1c_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
RZC70281	tRNA_synt_1c_R1	PF04558	2e-48	1
RZC70281	tRNA-synt_1c	PF00749	1e-119	2
RZC70281	tRNA-synt_1c_C	PF03950	3.4e-27	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	RZC70281	2455	757aa	RZC70281

Gene Model

Click here to download C5167_034099's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download C5167_034099's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
C5167_034099

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
C5167_034099

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression