RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Bra031214	Gene ID		Accession	-
Symbol		Alias	-	Full Name	AT4G39280 (E=2e-246) \| phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative
Status	Confidence	Length	3259 bases	Strand	Plus strand
Position	A09 : 31977352 - 31980610	RNA binding domain	PheRS_DBD1 , PheRS_DBD3 , tRNA-synt_2d
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Bra031214	PheRS_DBD1	PF18552	2.6e-07	1
Bra031214	PheRS_DBD3	PF18553	6.5e-14	2
Bra031214	tRNA-synt_2d	PF01409	8.2e-94	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Bra031214.1	1464	487aa	Bra031214.1-P

Gene Model

Click here to download Bra031214's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Bra031214's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Bra031214

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Bra031214

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression