RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Bra024481	Gene ID		Accession	-
Symbol		Alias	-	Full Name	AT2G18020 (E=1e-142) EMB2296 \| EMB2296 (embryo defective 2296); structural constituent of ribosome
Status	Confidence	Length	1523 bases	Strand	Minus strand
Position	A06 : 16088765 - 16090287	RNA binding domain	Ribosomal_L2 , Ribosomal_L2_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Bra024481	Ribosomal_L2	PF00181	3e-17	1
Bra024481	Ribosomal_L2_C	PF03947	9.2e-46	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Bra024481.1	771	256aa	Bra024481.1-P

Gene Model

Click here to download Bra024481's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Bra024481's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Bra024481

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Bra024481

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression