Description

Ensembl ID Bra021701 Gene ID Accession -
Symbol Alias - Full Name AT1G80070 (E=0.0) SUS2, EMB33, EMB177, EMB14 | SUS2 (ABNORMAL SUSPENSOR 2)
Status Confidence Length 9433 bases Strand Plus strand
Position A04 : 13957341 - 13966773 RNA binding domain PROCT , PRP8_domainIV , PRO8NT , U6-snRNA_bdg , PROCN , RRM_4 , U5_2-snRNA_bdg
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Bra021701 PROCT PF08084 7.4e-51 1
Bra021701 PRP8_domainIV PF12134 5.9e-129 2
Bra021701 PRO8NT PF08082 4.4e-85 3
Bra021701 U6-snRNA_bdg PF10596 8.6e-63 4
Bra021701 U6-snRNA_bdg PF10596 8.6e-63 5
Bra021701 PROCN PF08083 3.6e-231 6
Bra021701 RRM_4 PF10598 2.1e-44 7
Bra021701 U5_2-snRNA_bdg PF10597 1.5e-71 8

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Bra021701.1 7017 2338aa Bra021701.1-P

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Bra021701

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Bra021701

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression