RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Bra019037	Gene ID		Accession	-
Symbol		Alias	-	Full Name	AT4G27650 (E=5e-203) PEL1 \| PEL1 (PELOTA); translation release factor
Status	Confidence	Length	3190 bases	Strand	Minus strand
Position	A03 : 26615074 - 26618263	RNA binding domain	eRF1_2 , eRF1_3 , eRF1_1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Bra019037	eRF1_2	PF03464	2.9e-28	1
Bra019037	eRF1_3	PF03465	4.1e-27	2
Bra019037	eRF1_1	PF03463	4e-55	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Bra019037.1	1137	378aa	Bra019037.1-P

Gene Model

Click here to download Bra019037's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Bra019037's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Bra019037

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Bra019037

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression