Description

Ensembl ID Bra013431 Gene ID Accession -
Symbol Alias - Full Name AT1G80070 (E=0.0) SUS2, EMB33, EMB177, EMB14 | SUS2 (ABNORMAL SUSPENSOR 2)
Status Confidence Length 9434 bases Strand Minus strand
Position A01 : 5610079 - 5619512 RNA binding domain PROCT , PRP8_domainIV , PRO8NT , U6-snRNA_bdg , PROCN , RRM_4 , U5_2-snRNA_bdg
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Bra013431 PROCT PF08084 1.2e-50 1
Bra013431 PRP8_domainIV PF12134 6.2e-128 2
Bra013431 PRO8NT PF08082 7.7e-85 3
Bra013431 U6-snRNA_bdg PF10596 3.8e-90 4
Bra013431 PROCN PF08083 5.6e-235 5
Bra013431 RRM_4 PF10598 6.1e-44 6
Bra013431 U5_2-snRNA_bdg PF10597 1.5e-71 7

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Bra013431.1 7110 2369aa Bra013431.1-P

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Bra013431

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Bra013431

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression