Description

Ensembl ID Bra005076 Gene ID Accession -
Symbol Alias - Full Name AT1G80070 (E=0.0) SUS2, EMB33, EMB177, EMB14 | SUS2 (ABNORMAL SUSPENSOR 2)
Status Confidence Length 6935 bases Strand Plus strand
Position A05 : 3315301 - 3322235 RNA binding domain PROCT , PRP8_domainIV , PRO8NT , U6-snRNA_bdg , PROCN , RRM_4 , U5_2-snRNA_bdg
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Bra005076 PROCT PF08084 1.5e-49 1
Bra005076 PRP8_domainIV PF12134 1.1e-128 2
Bra005076 PRO8NT PF08082 2.2e-85 3
Bra005076 U6-snRNA_bdg PF10596 1.6e-88 4
Bra005076 PROCN PF08083 4.5e-198 5
Bra005076 PROCN PF08083 4.5e-198 6
Bra005076 RRM_4 PF10598 4e-45 7
Bra005076 U5_2-snRNA_bdg PF10597 4.2e-71 8

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Bra005076.1 6870 2289aa Bra005076.1-P

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Bra005076

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Bra005076

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression