RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Bra000182	Gene ID		Accession	-
Symbol		Alias	-	Full Name	AT2G40290 (E=1e-162) \| eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putative
Status	Confidence	Length	2339 bases	Strand	Minus strand
Position	A03 : 9763827 - 9766165	RNA binding domain	EIF_2_alpha , S1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Bra000182	EIF_2_alpha	PF07541	3.2e-41	1
Bra000182	S1	PF00575	3.4e-12	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Bra000182.1	1029	342aa	Bra000182.1-P

Gene Model

Click here to download Bra000182's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Bra000182's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Bra000182

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Bra000182

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression