RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Bo6g056320	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain
Status	Confidence	Length	5284 bases	Strand	Minus strand
Position	C6 : 15225883 - 15231166	RNA binding domain	DNA_pol_A_exo1 , PMC2NT , HRDC
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Bo6g056320	DNA_pol_A_exo1	PF01612	3.1e-44	1
Bo6g056320	PMC2NT	PF08066	5.5e-05	2
Bo6g056320	HRDC	PF00570	7.6e-12	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Bo6g056320.1	2607	868aa	Bo6g056320.1

Gene Model

Click here to download Bo6g056320's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Bo6g056320's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Bo6g056320

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Bo6g056320

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression