RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	BjuA09g24520S	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	6347 bases	Strand	Plus strand
Position	A09 : 14520331 - 14526677	RNA binding domain	AD , RNase_H
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
cds	AD	PF09793	2.7e-18	1
cds	RNase_H	PF00075	1.4e-07	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	mRNA.BjuA09g24520S	2271	756aa	cds.BjuA09g24520S

Gene Model

Click here to download BjuA09g24520S's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download BjuA09g24520S's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
BjuA09g24520S

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
BjuA09g24520S

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression