Description

Ensembl ID BVRB_8g192580 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 19305 bases Strand Minus strand
Position 8 : 30949983 - 30969287 RNA binding domain ResIII , DEAD , DND1_DSRM , dsrm , Ribonucleas_3_3 , Dicer_dimer , Ribonuclease_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KMT03583 ResIII PF04851 2.2e-13 1
KMT03583 DEAD PF00270 1.6e-15 2
KMT03583 DND1_DSRM PF14709 8.5e-15 3
KMT03583 dsrm PF00035 1.6e-14 4
KMT03583 dsrm PF00035 1.6e-14 5
KMT03583 Ribonucleas_3_3 PF14622 2.1e-23 6
KMT03583 Dicer_dimer PF03368 1.3e-23 7
KMT03583 Ribonuclease_3 PF00636 4e-31 8
KMT03583 Ribonuclease_3 PF00636 4e-31 9

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KMT03583 5294 1595aa KMT03583

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_8g192580beta_vulgarisKMT1275841.95425beta_vulgarisKMT035839.153615.45455
BVRB_8g192580beta_vulgarisKMT1275944.50727.0423beta_vulgarisKMT035839.905966.01881
BVRB_8g192580beta_vulgarisKMT1471545.448131.0811beta_vulgarisKMT0358340.062727.3981
BVRB_8g192580beta_vulgarisKMT2018234.888422.5659beta_vulgarisKMT0358343.134827.8997
BVRB_8g192580beta_vulgarisKMT1097458.42740.4494beta_vulgarisKMT035833.260192.25705
BVRB_8g192580beta_vulgarisKMS9535442.176226.0104beta_vulgarisKMT0358325.517215.7367
BVRB_8g192580beta_vulgarisKMT0358276.556571.474beta_vulgarisKMT0358375.548670.5329

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_8g192580beta_vulgarisKMT0358371.661457.1787theobroma_cacaoEOY2962967.633153.9645
BVRB_8g192580beta_vulgarisKMT0358369.592554.8589citrullus_lanatusCla97C06G121290.167.641753.3211
BVRB_8g192580beta_vulgarisKMT035836046.3323ficus_caricaFCD_00023491-RA:cds70.471354.4183
BVRB_8g192580beta_vulgarisKMT0358329.529822.4451ficus_caricaFCD_00017789-RA:cds65.235549.5845
BVRB_8g192580beta_vulgarisKMT0358310.03138.02508ficus_caricaFCD_00023490-RA:cds65.306152.2449
BVRB_8g192580beta_vulgarisKMT0358337.93129.4044ficus_caricaFCD_00017792-RA:cds66.6351.652
BVRB_8g192580beta_vulgarisKMT0358372.852756.8025prunus_dulcisVVA2505970.896955.2776
BVRB_8g192580beta_vulgarisKMT0358359.059643.4483oryza_longistaminataKN538891.1_FGP03561.649245.3534
BVRB_8g192580beta_vulgarisKMT0358357.053341.5047oryza_rufipogonORUFI04G19790.158.747642.7373
BVRB_8g192580beta_vulgarisKMT0358369.404454.4828lupinus_angustifoliusOIW1861868.249153.5758
BVRB_8g192580beta_vulgarisKMT0358344.32634.5455manihot_esculentaOAY3178771.198455.4884
BVRB_8g192580beta_vulgarisKMT0358368.777453.7931medicago_truncatulaKEH3216667.507752.8
BVRB_8g192580beta_vulgarisKMT0358360.188144.326ananas_comosusAco008189.1.mrna158.751543.2681
BVRB_8g192580beta_vulgarisKMT0358368.65253.7931cucumis_meloMELO3C010254.2.166.283351.937
BVRB_8g192580beta_vulgarisKMT0358363.072146.7085oryza_glaberrimaORGLA04G0154300.160.712144.9608
BVRB_8g192580beta_vulgarisKMT0358362.758646.395oryza_brachyanthaOB04G25430.161.298245.3154
BVRB_8g192580beta_vulgarisKMT0358363.448346.8966triticum_urartuTuG1812G0200004138.01.T0162.353746.0875
BVRB_8g192580beta_vulgarisKMT0358369.780654.3574vigna_unguiculataVigun03g367100.1.v1.268.198553.125
BVRB_8g192580beta_vulgarisKMT0358369.153654.1693glycine_maxKRH0354467.420552.8117
BVRB_8g192580beta_vulgarisKMT0358369.843353.9812glycine_maxKRH2010368.051352.5962
BVRB_8g192580beta_vulgarisKMT0358369.90654.7335vigna_radiataVradi07g21060.168.237553.4272
BVRB_8g192580beta_vulgarisKMT0358363.761847.0846triticum_turgidumTRITD2Bv1G181920.859.127943.6628
BVRB_8g192580beta_vulgarisKMT0358363.385646.8966triticum_turgidumTRITD2Av1G218730.662.292146.0875
BVRB_8g192580beta_vulgarisKMT0358372.915456.7398prunus_persicaONH9853070.871455.1493
BVRB_8g192580beta_vulgarisKMT0358339.059630.5956quercus_lobataQL02p091637:mrna70.157754.955
BVRB_8g192580beta_vulgarisKMT0358359.122346.8339quercus_lobataQL02p091725:mrna50.079739.6707
BVRB_8g192580beta_vulgarisKMT0358336.802529.0282quercus_lobataQL02p091694:mrna69.964255.1847
BVRB_8g192580beta_vulgarisKMT0358312.03769.279quercus_lobataQL02p091746:mrna61.736347.5884
BVRB_8g192580beta_vulgarisKMT0358366.206951.8495ipomoea_trilobaitb07g24450.t168.438153.5969
BVRB_8g192580beta_vulgarisKMT0358368.589353.1034helianthus_annuusmRNA:HanXRQr2_Chr12g052479167.572652.3162
BVRB_8g192580beta_vulgarisKMT035839.968658.15047cynara_cardunculusKVH9371167.659655.3191
BVRB_8g192580beta_vulgarisKMT0358318.495314.3574cynara_cardunculusKVH9371675.255158.4184
BVRB_8g192580beta_vulgarisKMT0358370.72154.8589populus_trichocarpaPotri.006G188800.2.v4.168.738653.3211
BVRB_8g192580beta_vulgarisKMT0358359.623843.7618oryza_indicaBGIOSGA014744-PA60.342644.2893
BVRB_8g192580beta_vulgarisKMT035835.266463.88715lolium_perennecds.KYUSt_chr2.4272766.666749.2063
BVRB_8g192580beta_vulgarisKMT0358354.545540lolium_perennecds.KYUSt_chr2.4272460.291144.2134
BVRB_8g192580beta_vulgarisKMT0358314.35748.90282pisum_sativumPsat2g104200.1.cds55.447934.3826
BVRB_8g192580beta_vulgarisKMT0358369.529853.9185pisum_sativumPsat4g034160.1.cds67.953452.6961
BVRB_8g192580beta_vulgarisKMT0358365.642649.279brassica_junceacds.BjuA10g17020S61.479746.1538
BVRB_8g192580beta_vulgarisKMT0358365.454549.0909brassica_junceacds.BjuB02g34930S63.619747.7148
BVRB_8g192580beta_vulgarisKMT0358358.746143.1975leersia_perrieriLPERR04G14810.161.12244.9446
BVRB_8g192580beta_vulgarisKMT035838.025086.01881setaria_viridisTKV9991465.64149.2308
BVRB_8g192580beta_vulgarisKMT0358363.51146.7712setaria_viridisTKW0536562.071145.7108
BVRB_8g192580beta_vulgarisKMT0358371.53655.047malus_domestica_goldenmRNA:MD15G013900069.02653.1155
BVRB_8g192580beta_vulgarisKMT0358368.087853.7931quercus_subercds-POE90421.168.087853.7931
BVRB_8g192580beta_vulgarisKMT0358336.551728.9028quercus_subercds-POE95936.169.404854.881
BVRB_8g192580beta_vulgarisKMT0358355.360540.2508oryza_nivaraONIVA04G16680.157.977742.1536
BVRB_8g192580beta_vulgarisKMT0358368.777454.4201citrus_clementinaESR6692370.140755.4987
BVRB_8g192580beta_vulgarisKMT035837.147345.51724setaria_italicaKQK9403863.687149.162
BVRB_8g192580beta_vulgarisKMT035836044.0125setaria_italicaKQK9802961.424945.0578
BVRB_8g192580beta_vulgarisKMT0358365.203849.4671arabidopsis_hallerig12085.t163.530848.1979
BVRB_8g192580beta_vulgarisKMT0358363.385646.395avena_sativa_ot3098cds.AVESA.00001b.r3.2Dg0001479.360.071343.9691
BVRB_8g192580beta_vulgarisKMT0358363.197546.2069avena_sativa_ot3098cds.AVESA.00001b.r3.2Ag0001555.758.981943.1246
BVRB_8g192580beta_vulgarisKMT0358363.072146.2696avena_sativa_ot3098cds.AVESA.00001b.r3.2Cg0002274.157.518642.1955
BVRB_8g192580beta_vulgarisKMT0358365.956148.8401asparagus_officinalisONK7040964.146347.5
BVRB_8g192580beta_vulgarisKMT0358369.592553.4796eucalyptus_grandisKCW7897966.948151.4475
BVRB_8g192580beta_vulgarisKMT0358366.457751.2226fraxinus_excelsiorFRAEX38873_v2_000399910.1.cds67.258951.8401
BVRB_8g192580beta_vulgarisKMT0358368.213252.79fraxinus_excelsiorFRAEX38873_v2_000035190.1.cds66.1851.2165
BVRB_8g192580beta_vulgarisKMT0358362.319746.0815aegilops_tauschiiAET2Gv20823100.2662.752546.4015
BVRB_8g192580beta_vulgarisKMT0358352.727339.1223amborella_trichopodaERN1034161.342145.5142
BVRB_8g192580beta_vulgarisKMT0358364.263346.9592sorghum_bicolorOQU8193861.561644.985
BVRB_8g192580beta_vulgarisKMT0358386.018876.9279chenopodium_quinoaAUR62042026-RA:cds58.283852.124
BVRB_8g192580beta_vulgarisKMT0358315.485911.2853juglans_regiacds.Jr06_20120_p164.829447.2441
BVRB_8g192580beta_vulgarisKMT0358365.705349.0909brassica_oleraceaBo9g151990.161.683346.0859
BVRB_8g192580beta_vulgarisKMT0358370.031354.5455coffea_canephoraCDP1052467.492452.568
BVRB_8g192580beta_vulgarisKMT0358327.648920.4389digitaria_exilisDexi7B01G0012830.1:cds63.362146.8391
BVRB_8g192580beta_vulgarisKMT0358342.507830.5956digitaria_exilisDexi7A01G0012220.1:cds59.110742.5458
BVRB_8g192580beta_vulgarisKMT035836.20694.38871digitaria_exilisDexi7B01G0012840.1:cds38.521427.2374
BVRB_8g192580beta_vulgarisKMT0358360.877744.3887eragrostis_curvulaTVU1529557.797642.1429
BVRB_8g192580beta_vulgarisKMT0358318.746113.8558eutrema_salsugineumESQ4205364.301147.5269
BVRB_8g192580beta_vulgarisKMT0358344.95333.8558eutrema_salsugineumESQ4205462.620147.1616
BVRB_8g192580beta_vulgarisKMT0358363.385646.395avena_sativa_sangAVESA.00010b.r2.2DG0373980.1.CDS61.797145.2323
BVRB_8g192580beta_vulgarisKMT0358363.009446.2069avena_sativa_sangAVESA.00010b.r2.2CG0308840.1.CDS61.430345.0489
BVRB_8g192580beta_vulgarisKMT0358363.197546.2069avena_sativa_sangAVESA.00010b.r2.2AG0229640.1.CDS61.613745.0489
BVRB_8g192580beta_vulgarisKMT0358369.216353.1661trifolium_pratenseTp57577_TGAC_v2_mRNA1631067.399351.7705
BVRB_8g192580beta_vulgarisKMT0358358.307242.6959oryza_barthiiOBART04G18350.162.710745.9204
BVRB_8g192580beta_vulgarisKMT0358370.219455.1097solanum_lycopersicumSolyc07g005030.3.165.9651.7668
BVRB_8g192580beta_vulgarisKMT035837.962386.26959hordeum_vulgareHORVU.MOREX.r3.2HG0180800.167.553253.1915
BVRB_8g192580beta_vulgarisKMT0358350.783736.9906hordeum_vulgareHORVU.MOREX.r3.2HG0180750.162.355745.4196
BVRB_8g192580beta_vulgarisKMT0358358.369945.4545vigna_angularisKOM3292768.355453.2305
BVRB_8g192580beta_vulgarisKMT0358371.159955.2978gossypium_raimondiiKJB5489068.621553.3253
BVRB_8g192580beta_vulgarisKMT0358364.263347.5235panicum_halliiPUZ4794963.115846.6749
BVRB_8g192580beta_vulgarisKMT0358364.388750.4075cajanus_cajanC.cajan_29904.t69.34554.2876
BVRB_8g192580beta_vulgarisKMT0358365.454549.2163brassica_rapa_ro18A10p026050.1_BraROA.163.58147.8076
BVRB_8g192580beta_vulgarisKMT0358371.222655.4859rosa_chinensisPRQ4619468.848553.6364
BVRB_8g192580beta_vulgarisKMT0358365.76850.0313musa_acuminataMa09_p22980.164.514149.0775
BVRB_8g192580beta_vulgarisKMT0358369.90653.4169corymbia_citriodoracds-KAF8031365.167.453151.5426
BVRB_8g192580beta_vulgarisKMT0358364.576847.7743eragrostis_tefEt_7B_055210.CDS58.159243.0265
BVRB_8g192580beta_vulgarisKMT0358362.06945.4545eragrostis_tefEt_7A_052589.CDS58.166942.5969
BVRB_8g192580beta_vulgarisKMT0358358.244543.1975oryza_punctataOPUNC04G16040.160.481844.8568
BVRB_8g192580beta_vulgarisKMT0358369.341754.6082daucus_carotaKZM9611956.056844.146
BVRB_8g192580beta_vulgarisKMT0358362.946749.7179daucus_carotaKZN0006650.88740.1926
BVRB_8g192580beta_vulgarisKMT0358369.592554.9216daucus_carotaKZM9612152.01541.0497
BVRB_8g192580beta_vulgarisKMT0358363.636449.6552pistacia_veracds-EVM0003218.170.339654.8857
BVRB_8g192580beta_vulgarisKMT035839.529787.58621pistacia_veracds-EVM0026928.170.046155.7604
BVRB_8g192580beta_vulgarisKMT0358362.006345.2038echinochloa_crusgalliscaffold56.183.cds60.231443.9099
BVRB_8g192580beta_vulgarisKMT0358363.260246.0815brachypodium_distachyonKQJ8350962.054145.203
BVRB_8g192580beta_vulgarisKMT0358365.329249.5298arabidopsis_lyrataAl_scaffold_0006_196061.547646.6627
BVRB_8g192580beta_vulgarisKMT0358363.51146.9592triticum_dicoccoidesTRIDC2BG055930.260.047444.3983
BVRB_8g192580beta_vulgarisKMT0358358.369942.6959triticum_dicoccoidesTRIDC2AG052840.460.297944.1062
BVRB_8g192580beta_vulgarisKMT0358362.946746.6458oryza_sativaOs04t0509300-0260.591444.9004
BVRB_8g192580beta_vulgarisKMT0358365.454549.3417arabidopsis_thalianaAT5G20320.161.339646.2397
BVRB_8g192580beta_vulgarisKMT0358363.573746.5831zea_maysZm00001eb426330_P00163.295946.3795
BVRB_8g192580beta_vulgarisKMT0358312.22579.02821actinidia_chinensisPSS081546044.3077
BVRB_8g192580beta_vulgarisKMT0358371.53655.8621actinidia_chinensisPSS1392171.26855.6527
BVRB_8g192580beta_vulgarisKMT0358367.586252.6646olea_europaeaOE9A090472C168.837853.6398
BVRB_8g192580beta_vulgarisKMT0358370.156753.7304olea_europaeaOE9A007994C368.440452.4159
BVRB_8g192580beta_vulgarisKMT0358369.467154.6082lactuca_sativacds-PLY70057.167.273852.884
BVRB_8g192580beta_vulgarisKMT0358363.699147.0219triticum_aestivumTraesCS2D02G362700.162.523146.1538
BVRB_8g192580beta_vulgarisKMT0358363.761847.0846triticum_aestivumTraesCS2B02G383300.259.162343.6882
BVRB_8g192580beta_vulgarisKMT0358363.385646.8966triticum_aestivumTraesCS2A02G364700.262.292146.0875
BVRB_8g192580beta_vulgarisKMT0358363.134849.4671phaseolus_vulgarisESW2712069.785254.6778
BVRB_8g192580beta_vulgarisKMT0358365.579949.3417brassica_napusCDX9246963.702847.9294
BVRB_8g192580beta_vulgarisKMT0358365.642649.279brassica_napusCDY3581163.802647.8976
BVRB_8g192580beta_vulgarisKMT0358368.526653.7931cucumis_sativusKGN6522265.962651.7803
BVRB_8g192580beta_vulgarisKMT0358350.971840corylus_avellanaCav06g19780.t163.121149.5342
BVRB_8g192580beta_vulgarisKMT035839.341697.39812corylus_avellanaCav06g19790.t163.675250.4273
BVRB_8g192580beta_vulgarisKMT0358370.09454.9843capsicum_annuumPHT7540971.30155.9311
BVRB_8g192580beta_vulgarisKMT0358357.053341.5674oryza_glumipatulaOGLUM04G18390.158.747642.8018
BVRB_8g192580beta_vulgarisKMT0358323.134816.3009saccharum_spontaneumSspon.05G0024630-1T-mRNA-1:cds58.851741.4673
BVRB_8g192580beta_vulgarisKMT035839.21636.70846saccharum_spontaneumSspon.05G0024630-2C-mRNA-1:cds68.372149.7674
BVRB_8g192580beta_vulgarisKMT035837.398124.95298nymphaea_colorataNC3G0221090.1:cds51.982434.8018
BVRB_8g192580beta_vulgarisKMT0358372.413857.4922vitis_viniferaVitvi11g00618_P00171.208456.5351
BVRB_8g192580beta_vulgarisKMT0358341.692832.2257prunus_aviumPav_sc0000311.1_g630.1.mk:mrna72.361355.9304
BVRB_8g192580beta_vulgarisKMT0358361.567446.3323camelina_sativaCsa20g032260.160.579945.5891
BVRB_8g192580beta_vulgarisKMT0358365.830749.5298camelina_sativaCsa13g023280.160.693645.6647
BVRB_8g192580beta_vulgarisKMT0358365.517249.279camelina_sativaCsa08g014170.152.093739.1825
BVRB_8g192580beta_vulgarisKMT0358365.329251.2226sesamum_indicumSIN_1002893.t69.14454.2137
BVRB_8g192580beta_vulgarisKMT0358350.72138.6834kalanchoe_fedtschenkoiKaladp0064s0011.1.v1.166.094850.4085
BVRB_8g192580beta_vulgarisKMT0358316.112912.163kalanchoe_fedtschenkoiKaladp0783s0001.1.v1.166.408350.1292
BVRB_8g192580beta_vulgarisKMT0358331.159922.3197dioscorea_rotundataDRNTG_03021.162.280744.6115
BVRB_8g192580beta_vulgarisKMT0358311.91228.33856dioscorea_rotundataDRNTG_06753.169.090948.3636
BVRB_8g192580beta_vulgarisKMT0358363.51146.8966secale_cerealeSECCE2Rv1G0110930.162.492346.1444
BVRB_8g192580beta_vulgarisKMT0358356.739843.1348papaver_somniferumRZC5097863.464248.2468
BVRB_8g192580beta_vulgarisKMT0358367.83752.163papaver_somniferumRZC8069363.053648.4848

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression