Description

Ensembl ID BVRB_8g192570 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 14427 bases Strand Minus strand
Position 8 : 30934461 - 30948887 RNA binding domain DND1_DSRM , dsrm , Ribonucleas_3_3 , Dicer_dimer , Ribonuclease_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KMT03582 DND1_DSRM PF14709 3.3e-15 1
KMT03582 dsrm PF00035 6.4e-11 2
KMT03582 Ribonucleas_3_3 PF14622 2.6e-29 3
KMT03582 Dicer_dimer PF03368 2.6e-22 4
KMT03582 Ribonuclease_3 PF00636 2.4e-47 5
KMT03582 Ribonuclease_3 PF00636 2.4e-47 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KMT03582 5034 1574aa KMT03582

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_8g192570beta_vulgarisKMT1275842.241425.5747beta_vulgarisKMT035829.339265.65438
BVRB_8g192570beta_vulgarisKMT1275944.225427.3239beta_vulgarisKMT035829.974596.16264
BVRB_8g192570beta_vulgarisKMT1471536.628721.7639beta_vulgarisKMT0358232.719219.4409
BVRB_8g192570beta_vulgarisKMT2018228.549717.5456beta_vulgarisKMT0358235.768721.9822
BVRB_8g192570beta_vulgarisKMT1097457.303440.4494beta_vulgarisKMT035823.240152.28717
BVRB_8g192570beta_vulgarisKMS9535444.559627.4611beta_vulgarisKMT0358227.318916.8361
BVRB_8g192570beta_vulgarisKMT0358375.548670.5329beta_vulgarisKMT0358276.556571.474

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_8g192570beta_vulgarisKMT0358258.576944.2821theobroma_cacaoEOY2962954.556241.2426
BVRB_8g192570beta_vulgarisKMT0358257.115641.6137citrullus_lanatusCla97C06G121290.154.783739.9147
BVRB_8g192570beta_vulgarisKMT0358254.193141.1055ficus_caricaFCD_00023491-RA:cds62.81347.6436
BVRB_8g192570beta_vulgarisKMT0358231.448523.6341ficus_caricaFCD_00017789-RA:cds68.559651.5235
BVRB_8g192570beta_vulgarisKMT035823.748411.71537ficus_caricaFCD_00023490-RA:cds24.081611.0204
BVRB_8g192570beta_vulgarisKMT0358240.025430.6226ficus_caricaFCD_00017792-RA:cds69.383353.0837
BVRB_8g192570beta_vulgarisKMT0358260.038143.7738prunus_dulcisVVA2505957.657142.0378
BVRB_8g192570beta_vulgarisKMT0358251.524835.7052oryza_longistaminataKN538891.1_FGP03553.075936.7801
BVRB_8g192570beta_vulgarisKMT0358249.174133.4816oryza_rufipogonORUFI04G19790.149.967734.0219
BVRB_8g192570beta_vulgarisKMT0358256.92541.3596lupinus_angustifoliusOIW1861855.240440.1356
BVRB_8g192570beta_vulgarisKMT0358241.232531.6391manihot_esculentaOAY3178765.357550.1511
BVRB_8g192570beta_vulgarisKMT0358257.369841.2961medicago_truncatulaKEH3216655.569240
BVRB_8g192570beta_vulgarisKMT0358252.98637.9924ananas_comosusAco008189.1.mrna151.040436.5973
BVRB_8g192570beta_vulgarisKMT0358256.861540.7878cucumis_meloMELO3C010254.2.154.176838.862
BVRB_8g192570beta_vulgarisKMT0358253.303736.7853oryza_glaberrimaORGLA04G0154300.150.633734.9427
BVRB_8g192570beta_vulgarisKMT0358252.731936.277oryza_brachyanthaOB04G25430.150.826734.9663
BVRB_8g192570beta_vulgarisKMT0358253.494336.7853triticum_urartuTuG1812G0200004138.01.T0151.879235.6747
BVRB_8g192570beta_vulgarisKMT0358257.496841.3596vigna_unguiculataVigun03g367100.1.v1.255.453439.8897
BVRB_8g192570beta_vulgarisKMT0358256.79841.169glycine_maxKRH0354454.645539.6088
BVRB_8g192570beta_vulgarisKMT0358257.496841.0419glycine_maxKRH2010355.284139.4624
BVRB_8g192570beta_vulgarisKMT0358257.75141.9314vigna_radiataVradi07g21060.155.630440.3917
BVRB_8g192570beta_vulgarisKMT0358254.002536.7853triticum_turgidumTRITD2Bv1G181920.849.418633.6628
BVRB_8g192570beta_vulgarisKMT0358253.430736.7853triticum_turgidumTRITD2Av1G218730.651.817635.6747
BVRB_8g192570beta_vulgarisKMT0358260.228743.8374prunus_persicaONH9853057.769742.0475
BVRB_8g192570beta_vulgarisKMT0358241.041932.4015quercus_lobataQL02p091637:mrna72.747757.4324
BVRB_8g192570beta_vulgarisKMT0358246.632833.9898quercus_lobataQL02p091725:mrna38.980428.4121
BVRB_8g192570beta_vulgarisKMT0358239.072431.0673quercus_lobataQL02p091694:mrna73.301658.2837
BVRB_8g192570beta_vulgarisKMT0358212.07129.33926quercus_lobataQL02p091746:mrna61.093247.2669
BVRB_8g192570beta_vulgarisKMT0358254.193138.7548ipomoea_trilobaitb07g24450.t155.281939.5334
BVRB_8g192570beta_vulgarisKMT0358257.052140.5972helianthus_annuusmRNA:HanXRQr2_Chr12g052479155.466339.4688
BVRB_8g192570beta_vulgarisKMT035823.939011.90597cynara_cardunculusKVH9371126.38312.766
BVRB_8g192570beta_vulgarisKMT0358216.137211.6264cynara_cardunculusKVH9371664.795946.6837
BVRB_8g192570beta_vulgarisKMT0358258.195742.3761populus_trichocarpaPotri.006G188800.2.v4.155.819640.6459
BVRB_8g192570beta_vulgarisKMT0358252.160136.2135oryza_indicaBGIOSGA014744-PA52.093936.1675
BVRB_8g192570beta_vulgarisKMT035822.54131.27065lolium_perennecds.KYUSt_chr2.4272731.74615.873
BVRB_8g192570beta_vulgarisKMT0358249.237634.8793lolium_perennecds.KYUSt_chr2.4272453.707638.0457
BVRB_8g192570beta_vulgarisKMT035827.369763.30368pisum_sativumPsat2g104200.1.cds28.087212.5908
BVRB_8g192570beta_vulgarisKMT0358257.433341.7408pisum_sativumPsat4g034160.1.cds55.392240.2574
BVRB_8g192570beta_vulgarisKMT0358254.828538.4371brassica_junceacds.BjuA10g17020S50.675335.5255
BVRB_8g192570beta_vulgarisKMT0358254.447338.2465brassica_junceacds.BjuB02g34930S52.224336.6849
BVRB_8g192570beta_vulgarisKMT0358251.524835.7052leersia_perrieriLPERR04G14810.152.902836.6601
BVRB_8g192570beta_vulgarisKMT035823.303681.46125setaria_viridisTKV9991426.666711.7949
BVRB_8g192570beta_vulgarisKMT0358253.557836.7217setaria_viridisTKW0536551.654435.4167
BVRB_8g192570beta_vulgarisKMT0358259.212243.075malus_domestica_goldenmRNA:MD15G013900056.382341.0163
BVRB_8g192570beta_vulgarisKMT0358255.654441.2325quercus_subercds-POE90421.154.921640.6897
BVRB_8g192570beta_vulgarisKMT0358238.818330.8132quercus_subercds-POE95936.172.738157.7381
BVRB_8g192570beta_vulgarisKMT0358247.395232.1474oryza_nivaraONIVA04G16680.148.982333.2239
BVRB_8g192570beta_vulgarisKMT0358257.306243.4562citrus_clementinaESR6692357.672643.734
BVRB_8g192570beta_vulgarisKMT035823.303681.65184setaria_italicaKQK9403829.050314.5251
BVRB_8g192570beta_vulgarisKMT0358251.842435.6417setaria_italicaKQK9802952.374836.0077
BVRB_8g192570beta_vulgarisKMT0358254.574339.0724arabidopsis_hallerig12085.t152.47437.5687
BVRB_8g192570beta_vulgarisKMT0358253.684936.7217avena_sativa_ot3098cds.AVESA.00001b.r3.2Dg0001479.350.20834.3434
BVRB_8g192570beta_vulgarisKMT0358253.557836.5311avena_sativa_ot3098cds.AVESA.00001b.r3.2Ag0001555.749.327133.6454
BVRB_8g192570beta_vulgarisKMT0358253.430736.4041avena_sativa_ot3098cds.AVESA.00001b.r3.2Cg0002274.148.084632.7616
BVRB_8g192570beta_vulgarisKMT0358254.764937.0394asparagus_officinalisONK7040952.56135.5488
BVRB_8g192570beta_vulgarisKMT0358256.988641.0419eucalyptus_grandisKCW7897954.101338.9626
BVRB_8g192570beta_vulgarisKMT0358253.748438.5006fraxinus_excelsiorFRAEX38873_v2_000399910.1.cds53.680238.4518
BVRB_8g192570beta_vulgarisKMT0358255.781440.7243fraxinus_excelsiorFRAEX38873_v2_000035190.1.cds53.406338.9903
BVRB_8g192570beta_vulgarisKMT0358253.049636.4676aegilops_tauschiiAET2Gv20823100.2652.714636.2374
BVRB_8g192570beta_vulgarisKMT0358249.110535.324amborella_trichopodaERN1034156.382240.5543
BVRB_8g192570beta_vulgarisKMT0358254.256737.1029sorghum_bicolorOQU8193851.291335.0751
BVRB_8g192570beta_vulgarisKMT0358268.996256.7344chenopodium_quinoaAUR62042026-RA:cds46.134237.9354
BVRB_8g192570beta_vulgarisKMT0358215.501911.4358juglans_regiacds.Jr06_20120_p164.04247.2441
BVRB_8g192570beta_vulgarisKMT0358254.764938.4371brassica_oleraceaBo9g151990.150.735735.6092
BVRB_8g192570beta_vulgarisKMT0358257.560441.8679coffea_canephoraCDP1052454.743239.8187
BVRB_8g192570beta_vulgarisKMT0358225.603618.2973digitaria_exilisDexi7B01G0012830.1:cds57.902341.3793
BVRB_8g192570beta_vulgarisKMT0358234.24423.2529digitaria_exilisDexi7A01G0012220.1:cds46.992231.9093
BVRB_8g192570beta_vulgarisKMT035822.922491.46125digitaria_exilisDexi7B01G0012840.1:cds17.89888.94942
BVRB_8g192570beta_vulgarisKMT0358252.477835.8323eragrostis_curvulaTVU1529549.166733.5714
BVRB_8g192570beta_vulgarisKMT0358218.869113.723eutrema_salsugineumESQ4205363.87146.4516
BVRB_8g192570beta_vulgarisKMT0358234.434624.0788eutrema_salsugineumESQ4205447.336233.1004
BVRB_8g192570beta_vulgarisKMT0358253.367236.5947avena_sativa_sangAVESA.00010b.r2.2DG0373980.1.CDS51.344735.2078
BVRB_8g192570beta_vulgarisKMT0358253.367236.4041avena_sativa_sangAVESA.00010b.r2.2CG0308840.1.CDS51.344735.0244
BVRB_8g192570beta_vulgarisKMT0358253.240236.4041avena_sativa_sangAVESA.00010b.r2.2AG0229640.1.CDS51.222535.0244
BVRB_8g192570beta_vulgarisKMT0358256.92540.9784trifolium_pratenseTp57577_TGAC_v2_mRNA1631054.700939.3773
BVRB_8g192570beta_vulgarisKMT0358250.635335.0064oryza_barthiiOBART04G18350.153.742437.1544
BVRB_8g192570beta_vulgarisKMT0358257.75142.4396solanum_lycopersicumSolyc07g005030.3.153.533639.3404
BVRB_8g192570beta_vulgarisKMT035823.494281.71537hordeum_vulgareHORVU.MOREX.r3.2HG0180800.129.255314.3617
BVRB_8g192570beta_vulgarisKMT0358248.030533.9898hordeum_vulgareHORVU.MOREX.r3.2HG0180750.158.198641.1855
BVRB_8g192570beta_vulgarisKMT0358250.190636.7217vigna_angularisKOM3292758.002942.4376
BVRB_8g192570beta_vulgarisKMT0358258.83142.1855gossypium_raimondiiKJB5489055.985540.1451
BVRB_8g192570beta_vulgarisKMT0358254.066137.1029panicum_halliiPUZ4794952.401535.9606
BVRB_8g192570beta_vulgarisKMT0358251.90637.6747cajanus_cajanC.cajan_29904.t55.165440.0405
BVRB_8g192570beta_vulgarisKMT0358254.637938.3736brassica_rapa_ro18A10p026050.1_BraROA.152.375236.7844
BVRB_8g192570beta_vulgarisKMT0358259.085142.3761rosa_chinensisPRQ4619456.363640.4242
BVRB_8g192570beta_vulgarisKMT0358254.955538.8818musa_acuminataMa09_p22980.153.19837.6384
BVRB_8g192570beta_vulgarisKMT0358257.75141.0419corymbia_citriodoracds-KAF8031365.154.990939.0805
BVRB_8g192570beta_vulgarisKMT0358254.574337.3571eragrostis_tefEt_7B_055210.CDS48.503733.2016
BVRB_8g192570beta_vulgarisKMT0358253.494336.9123eragrostis_tefEt_7A_052589.CDS49.471234.1363
BVRB_8g192570beta_vulgarisKMT0358250.698935.324oryza_punctataOPUNC04G16040.151.953136.1979
BVRB_8g192570beta_vulgarisKMT0358257.369842.3126daucus_carotaKZM9611945.767933.7557
BVRB_8g192570beta_vulgarisKMT0358251.397737.8653daucus_carotaKZN0006641.003530.2078
BVRB_8g192570beta_vulgarisKMT0358257.433342.4396daucus_carotaKZM9612142.361831.3027
BVRB_8g192570beta_vulgarisKMT0358252.287238.2465pistacia_veracds-EVM0003218.157.03441.7186
BVRB_8g192570beta_vulgarisKMT035823.621351.84244pistacia_veracds-EVM0026928.126.267313.3641
BVRB_8g192570beta_vulgarisKMT0358251.778934.9428echinochloa_crusgalliscaffold56.183.cds49.634633.4957
BVRB_8g192570beta_vulgarisKMT0358254.066136.7217brachypodium_distachyonKQJ8350952.33735.5474
BVRB_8g192570beta_vulgarisKMT0358254.701438.8818arabidopsis_lyrataAl_scaffold_0006_196050.856536.1488
BVRB_8g192570beta_vulgarisKMT0358253.811936.7853triticum_dicoccoidesTRIDC2BG055930.250.207534.3213
BVRB_8g192570beta_vulgarisKMT0358251.715435.8958triticum_dicoccoidesTRIDC2AG052840.452.720236.5933
BVRB_8g192570beta_vulgarisKMT0358253.113136.6582oryza_sativaOs04t0509300-0250.452634.822
BVRB_8g192570beta_vulgarisKMT0358254.701438.6277arabidopsis_thalianaAT5G20320.150.587535.7227
BVRB_8g192570beta_vulgarisKMT0358253.748436.5947zea_maysZm00001eb426330_P00152.80935.9551
BVRB_8g192570beta_vulgarisKMT0358212.26189.0216actinidia_chinensisPSS0815459.384643.6923
BVRB_8g192570beta_vulgarisKMT0358259.466343.8374actinidia_chinensisPSS1392158.463543.0981
BVRB_8g192570beta_vulgarisKMT0358255.654441.0419olea_europaeaOE9A090472C155.938741.2516
BVRB_8g192570beta_vulgarisKMT0358257.179240.9149olea_europaeaOE9A007994C355.045939.3884
BVRB_8g192570beta_vulgarisKMT0358258.068642.1855lactuca_sativacds-PLY70057.155.494840.3157
BVRB_8g192570beta_vulgarisKMT0358253.748436.6582triticum_aestivumTraesCS2D02G362700.152.061535.5077
BVRB_8g192570beta_vulgarisKMT0358254.002536.7853triticum_aestivumTraesCS2B02G383300.249.447433.6824
BVRB_8g192570beta_vulgarisKMT0358253.430736.7853triticum_aestivumTraesCS2A02G364700.251.817635.6747
BVRB_8g192570beta_vulgarisKMT0358250.95337.0394phaseolus_vulgarisESW2712055.578740.4019
BVRB_8g192570beta_vulgarisKMT0358254.764938.4371brassica_napusCDX9246952.49736.8453
BVRB_8g192570beta_vulgarisKMT0358254.828538.5006brassica_napusCDY3581152.589936.9287
BVRB_8g192570beta_vulgarisKMT0358256.099140.9149cucumis_sativusKGN6522253.289138.8654
BVRB_8g192570beta_vulgarisKMT0358250.127138.6277corylus_avellanaCav06g19780.t161.257847.205
BVRB_8g192570beta_vulgarisKMT035823.557811.77891corylus_avellanaCav06g19790.t123.931611.9658
BVRB_8g192570beta_vulgarisKMT0358257.623942.0584capsicum_annuumPHT7540957.844442.2194
BVRB_8g192570beta_vulgarisKMT0358249.04733.418oryza_glumipatulaOGLUM04G18390.149.838633.9574
BVRB_8g192570beta_vulgarisKMT0358214.04078.38628saccharum_spontaneumSspon.05G0024630-1T-mRNA-1:cds35.247221.0526
BVRB_8g192570beta_vulgarisKMT035824.447272.1601saccharum_spontaneumSspon.05G0024630-2C-mRNA-1:cds32.558115.814
BVRB_8g192570beta_vulgarisKMT035827.496825.08259nymphaea_colorataNC3G0221090.1:cds51.982435.2423
BVRB_8g192570beta_vulgarisKMT0358259.275744.028vitis_viniferaVitvi11g00618_P00157.521642.725
BVRB_8g192570beta_vulgarisKMT0358226.937717.9161prunus_aviumPav_sc0000311.1_g630.1.mk:mrna46.137130.6855
BVRB_8g192570beta_vulgarisKMT0358250.698935.6417camelina_sativaCsa20g032260.149.228934.6083
BVRB_8g192570beta_vulgarisKMT0358255.019139.0089camelina_sativaCsa13g023280.150.057835.4913
BVRB_8g192570beta_vulgarisKMT0358254.637938.7548camelina_sativaCsa08g014170.142.871430.4088
BVRB_8g192570beta_vulgarisKMT0358255.781441.8679sesamum_indicumSIN_1002893.t58.261443.7293
BVRB_8g192570beta_vulgarisKMT0358239.26326.8107kalanchoe_fedtschenkoiKaladp0064s0011.1.v1.150.490234.4771
BVRB_8g192570beta_vulgarisKMT0358216.836112.8971kalanchoe_fedtschenkoiKaladp0783s0001.1.v1.168.475452.4548
BVRB_8g192570beta_vulgarisKMT0358233.227424.0152dioscorea_rotundataDRNTG_03021.165.538847.3684
BVRB_8g192570beta_vulgarisKMT035827.179163.87548dioscorea_rotundataDRNTG_06753.141.090922.1818
BVRB_8g192570beta_vulgarisKMT0358253.494336.7853secale_cerealeSECCE2Rv1G0110930.151.943235.7187
BVRB_8g192570beta_vulgarisKMT0358250.254135.8958papaver_somniferumRZC5097855.469839.6213
BVRB_8g192570beta_vulgarisKMT0358256.226240.0254papaver_somniferumRZC8069351.573436.7133

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression