Description

Ensembl ID BVRB_7g176560 Gene ID Accession -
Symbol Alias - Full Name tRNA dimethylallyltransferase 2
Status Confidence Length 6397 bases Strand Plus strand
Position 7 : 43921418 - 43927814 RNA binding domain IPPT
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KMT05533 IPPT PF01715 1.2e-55 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KMT05533 1766 483aa KMT05533

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_7g176560beta_vulgarisKMT0612859.090936.9697beta_vulgarisKMT0553340.372725.2588
BVRB_7g176560beta_vulgarisKMS9875359.146338.1098beta_vulgarisKMT0553340.165625.8799
BVRB_7g176560beta_vulgarisKMT1893355.033634.8993beta_vulgarisKMT0553333.954521.5321
BVRB_7g176560beta_vulgarisKMT0831450.621135.0932beta_vulgarisKMT0553333.747423.3954
BVRB_7g176560beta_vulgarisKMT1319738.340823.5426beta_vulgarisKMT0553335.403721.7391

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_7g176560beta_vulgarisKMT0553371.221557.5569theobroma_cacaoEOY3354370.061156.6191
BVRB_7g176560beta_vulgarisKMT0553366.873751.5528citrullus_lanatusCla97C01G011800.168.287552.6427
BVRB_7g176560beta_vulgarisKMT0553365.631551.5528ficus_caricaFCD_00029314-RA:cds66.31852.092
BVRB_7g176560beta_vulgarisKMT0553372.463859.2132prunus_dulcisVVA2603872.016558.8477
BVRB_7g176560beta_vulgarisKMT0553356.935839.5445oryza_longistaminataKN538778.1_FGP05322.467315.6046
BVRB_7g176560beta_vulgarisKMT0553369.565255.2795lupinus_angustifoliusOIW0851269.854555.5094
BVRB_7g176560beta_vulgarisKMT0553369.772357.5569manihot_esculentaOAY3816567.670755.8233
BVRB_7g176560beta_vulgarisKMT0553370.807554.8654medicago_truncatulaAES8843771.101955.0936
BVRB_7g176560beta_vulgarisKMT0553358.385142.029ananas_comosusAco022263.1.mrna150.088836.0568
BVRB_7g176560beta_vulgarisKMT0553365.424450.9317cucumis_meloMELO3C004783.2.166.807652.0085
BVRB_7g176560beta_vulgarisKMT0553362.732945.1346oryza_glaberrimaORGLA01G0390400.165.021546.7811
BVRB_7g176560beta_vulgarisKMT0553361.697744.3064oryza_brachyanthaOB01G54470.164.782646.5217
BVRB_7g176560beta_vulgarisKMT0553361.904844.5135triticum_urartuTuG1812G0200002927.01.T0164.163146.1373
BVRB_7g176560beta_vulgarisKMT0553368.737155.4865vigna_unguiculataVigun11g129900.1.v1.268.879755.6017
BVRB_7g176560beta_vulgarisKMT0553371.221557.5569glycine_maxKRH3049871.966558.159
BVRB_7g176560beta_vulgarisKMT0553343.271233.3333glycine_maxKRH2517869.435253.4884
BVRB_7g176560beta_vulgarisKMT0553356.521740.9938vigna_radiataVradi02g06720.152.399238.0038
BVRB_7g176560beta_vulgarisKMT0553331.4720.2899triticum_turgidumTRITD2Av1G151000.257.794737.2624
BVRB_7g176560beta_vulgarisKMT0553361.490744.7205triticum_turgidumTRITD2Bv1G126590.263.733946.3519
BVRB_7g176560beta_vulgarisKMT0553372.670859.4203prunus_persicaONI0108572.222259.0535
BVRB_7g176560beta_vulgarisKMT0553372.049758.1781quercus_lobataQL01p013431:mrna67.704354.6693
BVRB_7g176560beta_vulgarisKMT0553367.080755.6936helianthus_annuusmRNA:HanXRQr2_Chr11g051037171.052658.9912
BVRB_7g176560beta_vulgarisKMT0553366.873753.4161cynara_cardunculusKVI0008861.641249.2366
BVRB_7g176560beta_vulgarisKMT0553368.944155.0725populus_trichocarpaPotri.009G147600.3.v4.167.408953.8462
BVRB_7g176560beta_vulgarisKMT0553361.904844.5135oryza_indicaBGIOSGA005256-PA64.718646.5368
BVRB_7g176560beta_vulgarisKMT0553353.002138.5093lolium_perennecds.KYUSt_chr2.3023263.840446.384
BVRB_7g176560beta_vulgarisKMT0553370.393455.0725pisum_sativumPsat7g189920.1.cds71.881656.2368
BVRB_7g176560beta_vulgarisKMT0553367.287850.7246brassica_junceacds.BjuB01g37400S68.134251.3627
BVRB_7g176560beta_vulgarisKMT0553368.737151.9669brassica_junceacds.BjuA04g17610S46.629235.2528
BVRB_7g176560beta_vulgarisKMT0553361.904845.9627setaria_viridisTKW1905565.570248.6842
BVRB_7g176560beta_vulgarisKMT0553371.014557.3499malus_domestica_goldenmRNA:MD03G011330070.576156.9959
BVRB_7g176560beta_vulgarisKMT0553341.821929.1925quercus_subercds-POE87694.160.47942.2156
BVRB_7g176560beta_vulgarisKMT0553372.463858.3851quercus_subercds-POE87696.167.049854.023
BVRB_7g176560beta_vulgarisKMT0553369.979356.9358citrus_clementinaESR3755667.196854.672
BVRB_7g176560beta_vulgarisKMT0553361.904846.1698setaria_italicaKQL0877565.570248.9035
BVRB_7g176560beta_vulgarisKMT0553368.944151.7598arabidopsis_hallerig27215.t172.707454.5852
BVRB_7g176560beta_vulgarisKMT0553361.904844.9275avena_sativa_ot3098cds.AVESA.00001b.r3.2Dg0003316.164.025746.4668
BVRB_7g176560beta_vulgarisKMT0553345.134634.7826avena_sativa_ot3098cds.AVESA.00001b.r3.2Ag0000761.263.005848.5549
BVRB_7g176560beta_vulgarisKMT0553361.490744.3064avena_sativa_ot3098cds.AVESA.00001b.r3.2Cg0001442.163.597445.8244
BVRB_7g176560beta_vulgarisKMT0553353.002136.646asparagus_officinalisONK5739449.230834.0385
BVRB_7g176560beta_vulgarisKMT0553311.59428.28157asparagus_officinalisONK7642564.367845.977
BVRB_7g176560beta_vulgarisKMT0553316.149111.5942asparagus_officinalisONK6397661.904844.4444
BVRB_7g176560beta_vulgarisKMT0553349.689437.4741eucalyptus_grandisKCW5077562.547.1354
BVRB_7g176560beta_vulgarisKMT0553368.737155.2795eucalyptus_grandisKCW5077670.042256.3291
BVRB_7g176560beta_vulgarisKMT0553366.873754.0373fraxinus_excelsiorFRAEX38873_v2_000200790.1.cds67.291754.375
BVRB_7g176560beta_vulgarisKMT0553362.732944.9275aegilops_tauschiiAET2Gv20582300.363.12545.2083
BVRB_7g176560beta_vulgarisKMT0553356.521740.1656oryza_meridionalisOMERI01G42060.362.186844.1913
BVRB_7g176560beta_vulgarisKMT0553361.490747.205amborella_trichopodaERM9815863.733948.927
BVRB_7g176560beta_vulgarisKMT0553360.869646.1698sorghum_bicolorEES0213562.686647.548
BVRB_7g176560beta_vulgarisKMT0553372.463859.0062corchorus_capsularisOMO5766072.765159.2516
BVRB_7g176560beta_vulgarisKMT0553383.436974.3271chenopodium_quinoaAUR62009805-RA:cds84.133674.9478
BVRB_7g176560beta_vulgarisKMT0553381.780571.8427chenopodium_quinoaAUR62043078-RA:cds74.669265.5955
BVRB_7g176560beta_vulgarisKMT0553371.842757.3499juglans_regiacds.Jr14_17360_p173.987259.0618
BVRB_7g176560beta_vulgarisKMT0553371.842757.3499juglans_regiacds.Jr14_17350_p173.829858.9362
BVRB_7g176560beta_vulgarisKMT0553371.842757.3499juglans_regiacds.Jr14_17340_p173.67358.811
BVRB_7g176560beta_vulgarisKMT0553368.32352.588brassica_oleraceaBo4g164800.146.478935.7746
BVRB_7g176560beta_vulgarisKMT0553366.045552.1739coffea_canephoraCDP0696767.728253.5032
BVRB_7g176560beta_vulgarisKMT0553353.416140.3727digitaria_exilisDexi5A01G0040090.1:cds59.860845.2436
BVRB_7g176560beta_vulgarisKMT0553357.97143.8923digitaria_exilisDexi5B01G0039770.1:cds61.269146.3895
BVRB_7g176560beta_vulgarisKMT0553369.358254.4513cannabis_sativa_femalecds.evm.model.06.11266.336652.0792
BVRB_7g176560beta_vulgarisKMT0553362.111846.1698eragrostis_curvulaTVU3701060.120244.6894
BVRB_7g176560beta_vulgarisKMT0553362.732946.1698eragrostis_curvulaTVU3701365.584448.2684
BVRB_7g176560beta_vulgarisKMT0553369.358252.795eutrema_salsugineumESQ5123670.526353.6842
BVRB_7g176560beta_vulgarisKMT0553361.904844.9275avena_sativa_sangAVESA.00010b.r2.2DG0337090.2.CDS64.025746.4668
BVRB_7g176560beta_vulgarisKMT0553361.490744.3064avena_sativa_sangAVESA.00010b.r2.2CG0291900.2.CDS63.597445.8244
BVRB_7g176560beta_vulgarisKMT0553356.521741.4079avena_sativa_sangAVESA.00010b.r2.2AG0213280.1.CDS66.262148.5437
BVRB_7g176560beta_vulgarisKMT0553371.428656.1077trifolium_pratenseTp57577_TGAC_v2_mRNA1610472.938757.2939
BVRB_7g176560beta_vulgarisKMT0553360.455543.2712oryza_barthiiOBART01G45250.159.229242.3935
BVRB_7g176560beta_vulgarisKMT0553367.287852.381solanum_lycopersicumSolyc11g066960.2.167.010352.1649
BVRB_7g176560beta_vulgarisKMT0553361.697744.3064hordeum_vulgareHORVU.MOREX.r3.2HG0155140.163.811645.8244
BVRB_7g176560beta_vulgarisKMT0553366.459653.8302vigna_angularisKOM5057966.87554.1667
BVRB_7g176560beta_vulgarisKMT0553371.014555.6936gossypium_raimondiiKJB3534564.473750.5639
BVRB_7g176560beta_vulgarisKMT0553357.97142.029panicum_halliiPUZ5282757.73241.8557
BVRB_7g176560beta_vulgarisKMT0553362.9450.7246cajanus_cajanC.cajan_21651.t71.698157.783
BVRB_7g176560beta_vulgarisKMT0553367.701951.5528brassica_rapa_ro18A04p026570.1_BraROA.170.779253.8961
BVRB_7g176560beta_vulgarisKMT0553371.842757.3499rosa_chinensisPRQ3320670.961156.6462
BVRB_7g176560beta_vulgarisKMT0553364.389249.4824musa_acuminataMa11_p09950.167.46251.8438
BVRB_7g176560beta_vulgarisKMT0553369.151155.6936corymbia_citriodoracds-KAF8009453.170.613156.871
BVRB_7g176560beta_vulgarisKMT0553362.318845.5487eragrostis_tefEt_3A_025974.CDS66.008848.2456
BVRB_7g176560beta_vulgarisKMT0553362.525945.9627eragrostis_tefEt_3B_030340.CDS65.509848.1562
BVRB_7g176560beta_vulgarisKMT0553358.178140.7868oryza_punctataOPUNC01G44210.119.076713.3741
BVRB_7g176560beta_vulgarisKMT0553368.32354.6584daucus_carotaKZN0341872.687258.1498
BVRB_7g176560beta_vulgarisKMT0553365.838552.588pistacia_veracds-EVM0008181.172.602757.9909
BVRB_7g176560beta_vulgarisKMT0553343.685329.8137echinochloa_crusgalliscaffold443.22.cds59.943240.9091
BVRB_7g176560beta_vulgarisKMT0553362.318846.1698echinochloa_crusgalliscaffold151.170.cds65.577348.5839
BVRB_7g176560beta_vulgarisKMT0553362.111846.1698echinochloa_crusgalliscaffold78.419.cds65.217448.4783
BVRB_7g176560beta_vulgarisKMT0553363.35446.1698echinochloa_crusgalliscaffold482.38.cds22.125816.1244
BVRB_7g176560beta_vulgarisKMT0553345.962735.8178brachypodium_distachyonKQK2293461.15747.6584
BVRB_7g176560beta_vulgarisKMT0553368.944151.3458arabidopsis_lyrataAl_scaffold_0004_121370.851152.766
BVRB_7g176560beta_vulgarisKMT0553361.904844.5135triticum_dicoccoidesTRIDC2AG037850.363.347545.5508
BVRB_7g176560beta_vulgarisKMT0553361.490744.7205triticum_dicoccoidesTRIDC2BG040120.763.733946.3519
BVRB_7g176560beta_vulgarisKMT0553361.904844.5135oryza_sativaOs01t0968700-0164.718646.5368
BVRB_7g176560beta_vulgarisKMT0553355.693644.5135solanum_tuberosumPGSC0003DMT40006827170.976256.7282
BVRB_7g176560beta_vulgarisKMT0553369.772351.9669arabidopsis_thalianaAT2G27760.172.317653.8627
BVRB_7g176560beta_vulgarisKMT0553361.283645.5487zea_maysZm00001eb139980_P00462.978746.8085
BVRB_7g176560beta_vulgarisKMT0553371.842759.4203actinidia_chinensisPSS0314573.206760.5485
BVRB_7g176560beta_vulgarisKMT0553333.954526.7081olea_europaeaOE9A097216C164.566950.7874
BVRB_7g176560beta_vulgarisKMT0553367.494855.0725olea_europaeaOE9A079554C267.775555.3015
BVRB_7g176560beta_vulgarisKMT0553366.873753.4161lactuca_sativacds-PLY70531.169.313355.3648
BVRB_7g176560beta_vulgarisKMT0553315.73510.1449lactuca_sativacds-PLY63165.151.351433.1081
BVRB_7g176560beta_vulgarisKMT0553311.80129.31677lactuca_sativacds-PLY65222.154.285742.8571
BVRB_7g176560beta_vulgarisKMT0553355.900639.9586triticum_aestivumTraesCS2A02G265700.162.544.6759
BVRB_7g176560beta_vulgarisKMT0553361.490744.7205triticum_aestivumTraesCS2B02G276300.263.733946.3519
BVRB_7g176560beta_vulgarisKMT0553362.318844.5135triticum_aestivumTraesCS2D02G258000.364.592346.1373
BVRB_7g176560beta_vulgarisKMT0553368.32351.3458nicotiana_attenuataOIT0216065.606449.3042
BVRB_7g176560beta_vulgarisKMT0553369.772356.7288phaseolus_vulgarisESW0439370.649957.4423
BVRB_7g176560beta_vulgarisKMT0553367.701951.7598brassica_napusCDY3053270.474153.8793
BVRB_7g176560beta_vulgarisKMT0553368.32352.588brassica_napusCDX7713346.478935.7746
BVRB_7g176560beta_vulgarisKMT0553324.016618.8406arabis_alpinaKFK3001778.378461.4865
BVRB_7g176560beta_vulgarisKMT0553316.563113.2505arabis_alpinaKFK3238382.474265.9794
BVRB_7g176560beta_vulgarisKMT0553314.699810.352arabis_alpinaKFK2391666.981147.1698
BVRB_7g176560beta_vulgarisKMT0553334.575624.8447arabis_alpinaKFK3236872.608752.1739
BVRB_7g176560beta_vulgarisKMT0553365.217450.3106cucumis_sativusKGN6490266.455751.2658
BVRB_7g176560beta_vulgarisKMT0553332.505224.6377corylus_avellanaCav10g05600.t141.978631.8182
BVRB_7g176560beta_vulgarisKMT0553322.981419.8758corylus_avellanaCav10g05590.t166.867557.8313
BVRB_7g176560beta_vulgarisKMT0553367.908952.381capsicum_annuumPHT6915469.491553.6017
BVRB_7g176560beta_vulgarisKMT0553355.072538.5093oryza_glumipatulaOGLUM01G49610.654.508238.1148
BVRB_7g176560beta_vulgarisKMT0553336.024826.087saccharum_spontaneumSspon.03G0038520-1C-mRNA-1:cds59.58943.1507
BVRB_7g176560beta_vulgarisKMT0553363.975250.5176nymphaea_colorataNC1G0018190.1:cds61.067248.2213
BVRB_7g176560beta_vulgarisKMT0553369.565257.3499vitis_viniferaVitvi06g01415_P00170.886158.4388
BVRB_7g176560beta_vulgarisKMT0553372.463859.4203prunus_aviumPav_sc0003002.1_g090.1.mk:mrna67.437455.2987
BVRB_7g176560beta_vulgarisKMT0553370.393452.588camelina_sativaCsa16g051940.170.833352.9167
BVRB_7g176560beta_vulgarisKMT0553369.979352.588camelina_sativaCsa07g061220.170.711353.1381
BVRB_7g176560beta_vulgarisKMT0553369.979351.7598camelina_sativaCsa05g041050.172.376953.5332
BVRB_7g176560beta_vulgarisKMT0553364.803353.6232sesamum_indicumSIN_1010531.t67.456955.819
BVRB_7g176560beta_vulgarisKMT0553366.045551.1387kalanchoe_fedtschenkoiKaladp0056s0111.1.v1.168.898553.3477
BVRB_7g176560beta_vulgarisKMT0553363.975248.4472dioscorea_rotundataDRNTG_18782.165.189949.3671
BVRB_7g176560beta_vulgarisKMT0553360.869644.3064secale_cerealeSECCE2Rv1G0097070.160.618644.1237
BVRB_7g176560beta_vulgarisKMT0553369.565252.381papaver_somniferumRZC8228864.615448.6538

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression