Description

Ensembl ID BVRB_6g145890 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 19811 bases Strand Plus strand
Position 6 : 43029460 - 43049270 RNA binding domain SMN
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KMT07893 SMN PF06003 1.8e-05 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KMT07893 1500 309aa KMT07893

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_6g145890

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_6g145890beta_vulgarisKMT0789350.485431.7152chlamydomonas_reinhardtiiPNW8704446.706629.3413
BVRB_6g145890beta_vulgarisKMT0789372.168360.5178marchantia_polymorphaPTQ3175774.333362.3333
BVRB_6g145890beta_vulgarisKMT0789380.258971.1974theobroma_cacaoEOY2577066.133358.6667
BVRB_6g145890beta_vulgarisKMT0789383.171567.3139citrullus_lanatusCla97C11G206650.185.953269.5652
BVRB_6g145890beta_vulgarisKMT0789382.200671.521prunus_dulcisVVA2691083.552672.6974
BVRB_6g145890beta_vulgarisKMT0789373.786463.1068oryza_rufipogonORUFI08G00760.176.767765.6566
BVRB_6g145890beta_vulgarisKMT0789370.226560.5178lupinus_angustifoliusOIW0010284.108572.4806
BVRB_6g145890beta_vulgarisKMT0789370.226559.8706manihot_esculentaOAY4509483.141870.8812
BVRB_6g145890beta_vulgarisKMT0789379.28869.5793manihot_esculentaOAY3958482.214872.1477
BVRB_6g145890beta_vulgarisKMT0789378.964466.9903medicago_truncatulaKEH3274780.794768.543
BVRB_6g145890beta_vulgarisKMT0789378.317266.6667ananas_comosusAco011276.1.mrna167.222257.2222
BVRB_6g145890beta_vulgarisKMT0789373.786463.1068oryza_glaberrimaORGLA08G0001000.176.767765.6566
BVRB_6g145890beta_vulgarisKMT0789373.462863.1068oryza_brachyanthaOB08G10830.176.174565.4362
BVRB_6g145890beta_vulgarisKMT0789373.139260.5178triticum_urartuTuG1812S0000837000.01.T0175.585362.5418
BVRB_6g145890beta_vulgarisKMT0789381.553468.2848vigna_unguiculataVigun03g449100.1.v1.284.563870.8054
BVRB_6g145890beta_vulgarisKMT0789381.229867.9612glycine_maxKRH0187684.228270.4698
BVRB_6g145890beta_vulgarisKMT0789380.906267.6375glycine_maxKRH5128283.892670.1342
BVRB_6g145890beta_vulgarisKMT0789329.773521.6828triticum_turgidumTRITD7Av1G169710.166.18748.2014
BVRB_6g145890beta_vulgarisKMT0789329.773521.6828triticum_turgidumTRITD7Bv1G127590.166.18748.2014
BVRB_6g145890beta_vulgarisKMT0789382.200671.521prunus_persicaONI3644383.552672.6974
BVRB_6g145890beta_vulgarisKMT0789380.582568.6084quercus_lobataQL02p103359:mrna84.121671.6216
BVRB_6g145890beta_vulgarisKMT0789378.317268.2848ipomoea_trilobaitb10g21810.t181.208170.8054
BVRB_6g145890beta_vulgarisKMT0789380.582569.9029helianthus_annuusmRNA:HanXRQr2_Chr06g026786181.107570.3583
BVRB_6g145890beta_vulgarisKMT0789379.935369.2557cynara_cardunculusKVI1132781.2570.3947
BVRB_6g145890beta_vulgarisKMT0789379.28868.2848populus_trichocarpaPotri.004G229200.1.v4.185.365973.5192
BVRB_6g145890beta_vulgarisKMT0789373.786463.1068oryza_indicaBGIOSGA027775-PA76.767765.6566
BVRB_6g145890beta_vulgarisKMT0789373.462859.8706lolium_perennecds.KYUSt_chr7.1787077.210962.9252
BVRB_6g145890beta_vulgarisKMT0789329.126214.5631homo_sapiensENSP0000037011930.612215.3061
BVRB_6g145890beta_vulgarisKMT0789337.864125.2427homo_sapiensENSP0000035861649.159732.7731
BVRB_6g145890beta_vulgarisKMT0789329.126214.5631homo_sapiensENSP0000037008330.612215.3061
BVRB_6g145890beta_vulgarisKMT0789380.582566.6667pisum_sativumPsat4g000960.1.cds84.982970.3072
BVRB_6g145890beta_vulgarisKMT0789333.65719.0939caenorhabditis_elegansY71D11A.2.143.514624.6862
BVRB_6g145890beta_vulgarisKMT0789324.271813.2686caenorhabditis_elegansC41G7.1b.136.231919.8068
BVRB_6g145890beta_vulgarisKMT0789376.69965.3722brassica_junceacds.BjuB02g54850S7967.3333
BVRB_6g145890beta_vulgarisKMT0789377.022765.0485brassica_junceacds.BjuA06g04870S80.134767.6768
BVRB_6g145890beta_vulgarisKMT0789374.1160.1942brassica_junceacds.BjuA02g09590S74.836660.7843
BVRB_6g145890beta_vulgarisKMT0789337.864123.9482drosophila_melanogasterFBpp028914648.148130.4527
BVRB_6g145890beta_vulgarisKMT0789323.30111.3269drosophila_melanogasterFBpp030295431.858415.4867
BVRB_6g145890beta_vulgarisKMT0789373.462861.8123leersia_perrieriLPERR08G00910.176.689264.527
BVRB_6g145890beta_vulgarisKMT0789374.433764.4013setaria_viridisTKW3707777.441167.0034
BVRB_6g145890beta_vulgarisKMT0789375.728266.9903malus_domestica_goldenmRNA:MD15G037530076.721367.8689
BVRB_6g145890beta_vulgarisKMT0789381.229872.1683malus_domestica_goldenmRNA:MD08G020720082.565873.3553
BVRB_6g145890beta_vulgarisKMT0789380.582568.6084quercus_subercds-POF20169.184.121671.6216
BVRB_6g145890beta_vulgarisKMT0789373.786463.1068oryza_nivaraONIVA08G00730.176.767765.6566
BVRB_6g145890beta_vulgarisKMT0789380.258970.8738citrus_clementinaESR4467884.067874.2373
BVRB_6g145890beta_vulgarisKMT0789361.488755.0162setaria_italicaKQL2797676.923168.8259
BVRB_6g145890beta_vulgarisKMT0789366.990356.3107arabidopsis_hallerig14655.t180.232667.4419
BVRB_6g145890beta_vulgarisKMT0789373.139258.8997avena_sativa_ot3098cds.AVESA.00001b.r3.7Ag0002714.177.397362.3288
BVRB_6g145890beta_vulgarisKMT0789373.462859.2233avena_sativa_ot3098cds.AVESA.00001b.r3.7Dg0001713.370.061756.4815
BVRB_6g145890beta_vulgarisKMT0789373.139259.5469avena_sativa_ot3098cds.AVESA.00001b.r3.4Cg0001888.476.870862.585
BVRB_6g145890beta_vulgarisKMT0789379.28867.6375asparagus_officinalisONK7738481.395369.4352
BVRB_6g145890beta_vulgarisKMT0789379.611666.0194eucalyptus_grandisKCW5716881.45767.5497
BVRB_6g145890beta_vulgarisKMT0789350.485441.4239selaginella_moellendorffiiEFJ121367864
BVRB_6g145890beta_vulgarisKMT0789350.485441.4239selaginella_moellendorffiiEFJ293967864
BVRB_6g145890beta_vulgarisKMT0789368.608459.2233fraxinus_excelsiorFRAEX38873_v2_000013960.2.cds81.538570.3846
BVRB_6g145890beta_vulgarisKMT0789381.553471.1974fraxinus_excelsiorFRAEX38873_v2_000384010.1.cds83.168372.6073
BVRB_6g145890beta_vulgarisKMT0789372.815560.5178aegilops_tauschiiAET7Gv20800500.375.250862.5418
BVRB_6g145890beta_vulgarisKMT0789378.640867.3139amborella_trichopodaERM9975480.463668.8742
BVRB_6g145890beta_vulgarisKMT0789374.757364.0777sorghum_bicolorEES1438978.040566.8919
BVRB_6g145890beta_vulgarisKMT0789380.906271.521corchorus_capsularisOMO9550785.910775.945
BVRB_6g145890beta_vulgarisKMT0789387.702380.9062chenopodium_quinoaAUR62043876-RA:cds87.138380.3858
BVRB_6g145890beta_vulgarisKMT0789380.258973.4628chenopodium_quinoaAUR62032450-RA:cds82.666775.6667
BVRB_6g145890beta_vulgarisKMT0789369.579357.9288juglans_regiacds.Jr16_22790_p182.061168.3206
BVRB_6g145890beta_vulgarisKMT0789381.553467.3139juglans_regiacds.Jr16_22780_p183.720969.103
BVRB_6g145890beta_vulgarisKMT0789369.902958.5761juglans_regiacds.Jr16_22770_p181.818268.5606
BVRB_6g145890beta_vulgarisKMT0789377.346364.7249brassica_oleraceaBo7g080510.180.471467.3401
BVRB_6g145890beta_vulgarisKMT0789382.524369.5793coffea_canephoraCDO9765784.717671.4286
BVRB_6g145890beta_vulgarisKMT0789374.433763.754digitaria_exilisDexi6B01G0000800.1:cds77.441166.33
BVRB_6g145890beta_vulgarisKMT0789375.404564.4013digitaria_exilisDexi6A01G0001030.1:cds78.451267.0034
BVRB_6g145890beta_vulgarisKMT0789382.847971.8447cannabis_sativa_femalecds.evm.model.04.721.4.5bd9b13785.333374
BVRB_6g145890beta_vulgarisKMT0789375.080963.1068eragrostis_curvulaTVU4374478.114565.6566
BVRB_6g145890beta_vulgarisKMT0789377.669964.7249eutrema_salsugineumESQ3305979.734266.4452
BVRB_6g145890beta_vulgarisKMT0789373.139259.5469avena_sativa_sangAVESA.00010b.r2.4CG1290860.1.CDS60.916449.5957
BVRB_6g145890beta_vulgarisKMT0789373.139258.8997avena_sativa_sangAVESA.00010b.r2.7AG1243590.3.CDS77.397362.3288
BVRB_6g145890beta_vulgarisKMT0789373.139258.8997avena_sativa_sangAVESA.00010b.r2.7DG1365060.1.CDS77.397362.3288
BVRB_6g145890beta_vulgarisKMT0789378.640866.343trifolium_pratenseTp57577_TGAC_v2_mRNA621183.505270.4467
BVRB_6g145890beta_vulgarisKMT0789373.786463.1068oryza_barthiiOBART08G00720.176.767765.6566
BVRB_6g145890beta_vulgarisKMT0789380.582568.2848solanum_lycopersicumSolyc01g103020.3.177.329265.528
BVRB_6g145890beta_vulgarisKMT0789372.815560.5178hordeum_vulgareHORVU.MOREX.r3.7HG0706100.175.250862.5418
BVRB_6g145890beta_vulgarisKMT0789381.229867.9612vigna_angularisKOM3383284.511870.7071
BVRB_6g145890beta_vulgarisKMT0789379.611670.5502gossypium_raimondiiKJB6653584.536174.9141
BVRB_6g145890beta_vulgarisKMT0789374.433763.4304panicum_halliiPUZ4981977.441165.9933
BVRB_6g145890beta_vulgarisKMT0789377.022764.7249brassica_rapa_ro18A06p052100.1_BraROA.173.91362.1118
BVRB_6g145890beta_vulgarisKMT0789369.579357.9288brassica_rapa_ro18A02p047480.1_BraROA.166.770255.5901
BVRB_6g145890beta_vulgarisKMT0789380.582568.932rosa_chinensisPRQ1966081.907970.0658
BVRB_6g145890beta_vulgarisKMT0789344.983839.8058rosa_chinensisPRQ3442487.421477.3585
BVRB_6g145890beta_vulgarisKMT0789377.022765.0485musa_acuminataMa08_p34530.182.926870.0348
BVRB_6g145890beta_vulgarisKMT0789377.669965.0485musa_acuminataMa01_p10180.181.911368.6007
BVRB_6g145890beta_vulgarisKMT0789379.28865.6958corymbia_citriodoracds-KAF8016111.181.125867.2185
BVRB_6g145890beta_vulgarisKMT0789375.404563.4304eragrostis_tefEt_8B_059676.CDS78.451265.9933
BVRB_6g145890beta_vulgarisKMT0789375.080963.4304eragrostis_tefEt_8A_057317.CDS78.114565.9933
BVRB_6g145890beta_vulgarisKMT0789373.462862.4595oryza_punctataOPUNC08G00700.156.7548.25
BVRB_6g145890beta_vulgarisKMT0789379.28871.8447pistacia_veracds-EVM0028063.182.491674.7475
BVRB_6g145890beta_vulgarisKMT0789374.433764.4013echinochloa_crusgalliscaffold20.257.cds78.231367.6871
BVRB_6g145890beta_vulgarisKMT0789373.786463.754echinochloa_crusgalliscaffold260.43.cds70.807561.1801
BVRB_6g145890beta_vulgarisKMT0789376.051865.0485echinochloa_crusgalliscaffold9.2.cds31.713927.1255
BVRB_6g145890beta_vulgarisKMT0789325.242710.356ciona_savignyiENSCSAVP0000001433029.657812.1673
BVRB_6g145890beta_vulgarisKMT0789327.831716.1812ciona_savignyiENSCSAVP0000000737344.102625.641
BVRB_6g145890beta_vulgarisKMT0789373.139260.8414brachypodium_distachyonPNT6650975.838963.0872
BVRB_6g145890beta_vulgarisKMT0789377.346364.7249arabidopsis_lyratascaffold_500192.179.666766.6667
BVRB_6g145890beta_vulgarisKMT0789374.433761.165triticum_dicoccoidesTRIDC7AG045110.258.974448.4615
BVRB_6g145890beta_vulgarisKMT0789373.462860.8414triticum_dicoccoidesTRIDC7BG036900.575.919762.8763
BVRB_6g145890beta_vulgarisKMT0789362.135954.6926oryza_sativaOs08t0109900-0176.49467.3307
BVRB_6g145890beta_vulgarisKMT0789379.611668.2848solanum_tuberosumPGSC0003DMT40005338582.274270.5686
BVRB_6g145890beta_vulgarisKMT0789376.375463.754arabidopsis_thalianaAT2G02570.278.666765.6667
BVRB_6g145890beta_vulgarisKMT0789374.433763.4304zea_maysZm00001eb174130_P00577.441165.9933
BVRB_6g145890beta_vulgarisKMT0789380.582569.5793actinidia_chinensisPSS003248371.6667
BVRB_6g145890beta_vulgarisKMT0789381.229869.9029olea_europaeaOE9A078680C482.838371.2871
BVRB_6g145890beta_vulgarisKMT0789379.935368.6084lactuca_sativacds-PLY70418.180.71969.281
BVRB_6g145890beta_vulgarisKMT0789373.139260.5178triticum_aestivumTraesCS7A02G321500.175.585362.5418
BVRB_6g145890beta_vulgarisKMT0789373.786461.165triticum_aestivumTraesCS7B02G222400.176.254263.2107
BVRB_6g145890beta_vulgarisKMT0789372.815560.5178triticum_aestivumTraesCS7D02G318400.175.250862.5418
BVRB_6g145890beta_vulgarisKMT0789381.553467.9612phaseolus_vulgarisESW2591084.563870.4698
BVRB_6g145890beta_vulgarisKMT0789376.375464.0777brassica_napusCDY4520579.461366.6667
BVRB_6g145890beta_vulgarisKMT0789372.815559.8706brassica_napusCDY0935879.505365.371
BVRB_6g145890beta_vulgarisKMT0789377.346365.0485brassica_napusCDY0304672.865961.2805
BVRB_6g145890beta_vulgarisKMT0789373.462860.1942brassica_napusCDY4168475.165661.5894
BVRB_6g145890beta_vulgarisKMT0789377.669965.6958arabis_alpinaKFK3344880.808168.3502
BVRB_6g145890beta_vulgarisKMT0789354.692645.3074cucumis_sativusKGN5139790.860275.2688
BVRB_6g145890beta_vulgarisKMT0789379.611664.7249corylus_avellanaCav04g00410.t164.907752.7704
BVRB_6g145890beta_vulgarisKMT0789379.28867.3139capsicum_annuumPHT6368481.666769.3333
BVRB_6g145890beta_vulgarisKMT0789373.786463.1068oryza_glumipatulaOGLUM08G00790.176.767765.6566
BVRB_6g145890beta_vulgarisKMT0789371.197461.165saccharum_spontaneumSspon.06G0013170-4D-mRNA-1:cds74.324363.8514
BVRB_6g145890beta_vulgarisKMT0789331.06824.2718saccharum_spontaneumSspon.06G0013170-1A-mRNA-1:cds70.07354.7445
BVRB_6g145890beta_vulgarisKMT0789369.255759.2233saccharum_spontaneumSspon.06G0024630-1B-mRNA-1:cds62.02953.0435
BVRB_6g145890beta_vulgarisKMT0789358.252448.8673saccharum_spontaneumSspon.06G0013170-3C-mRNA-1:cds80.357167.4107
BVRB_6g145890beta_vulgarisKMT0789375.080964.0777saccharum_spontaneumSspon.06G0013170-2B-mRNA-1:cds71.165660.7362
BVRB_6g145890beta_vulgarisKMT0789378.317267.6375nymphaea_colorataNC1G0088600.1:cds64.19155.4377
BVRB_6g145890beta_vulgarisKMT0789382.847970.2265vitis_viniferaVitvi12g02126_P00185.049872.093
BVRB_6g145890beta_vulgarisKMT0789381.87771.1974prunus_aviumPav_sc0001196.1_g1890.1.mk:mrna83.223772.3684
BVRB_6g145890beta_vulgarisKMT0789377.993565.6958camelina_sativaCsa06g002680.180.333367.6667
BVRB_6g145890beta_vulgarisKMT0789378.317266.0194camelina_sativaCsa09g004900.180.666768
BVRB_6g145890beta_vulgarisKMT0789357.281648.8673camelina_sativaCsa04g008090.184.285771.9048
BVRB_6g145890beta_vulgarisKMT0789376.051862.7832sesamum_indicumSIN_1025985.t66.011254.4944
BVRB_6g145890beta_vulgarisKMT0789367.637552.1036chara_brauniiGBG8599759.37545.7386
BVRB_6g145890beta_vulgarisKMT0789380.582569.2557kalanchoe_fedtschenkoiKaladp0011s0063.1.v1.182.178270.6271
BVRB_6g145890beta_vulgarisKMT0789367.961258.8997kalanchoe_fedtschenkoiKaladp0035s0031.1.v1.1.CDS.180.459869.7318
BVRB_6g145890beta_vulgarisKMT0789379.935370.8738kalanchoe_fedtschenkoiKaladp0063s0064.1.v1.180.71971.5686
BVRB_6g145890beta_vulgarisKMT0789378.964467.3139dioscorea_rotundataDRNTG_05533.181.063169.103
BVRB_6g145890beta_vulgarisKMT0789363.75450.1618physcomitrium_patensPp3c1_22040V3.255.337143.5393
BVRB_6g145890beta_vulgarisKMT0789370.226555.9871physcomitrium_patensPp3c10_3582V3.165.165251.952
BVRB_6g145890beta_vulgarisKMT0789371.52156.3107physcomitrium_patensPp3c14_9240V3.367.378153.0488
BVRB_6g145890beta_vulgarisKMT0789370.226555.9871physcomitrium_patensPp3c10_3580V3.165.361452.1084
BVRB_6g145890beta_vulgarisKMT0789373.786460.8414secale_cerealeSECCE7Rv1G0493570.176.254262.8763
BVRB_6g145890beta_vulgarisKMT0789382.200670.8738papaver_somniferumRZC6387384.10672.5166
BVRB_6g145890beta_vulgarisKMT0789381.87770.8738papaver_somniferumRZC5349383.774872.5166

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression