Description

Ensembl ID BVRB_6g129590 Gene ID Accession -
Symbol Alias - Full Name Ribosomal RNA small subunit methyltransferase, mitochondrial
Status Confidence Length 2879 bases Strand Minus strand
Position 6 : 3028179 - 3031057 RNA binding domain RrnaAD , MTS
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KMT09489 RrnaAD PF00398 1.8e-58 1
KMT09489 MTS PF05175 3.2e-05 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KMT09489 2485 378aa KMT09489

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_6g129590beta_vulgarisKMT0995653.532636.6848beta_vulgarisKMT0948952.116435.7143
BVRB_6g129590beta_vulgarisKMT0017541.569826.1628beta_vulgarisKMT0948937.830723.8095

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_6g129590beta_vulgarisKMT0948974.338658.9947theobroma_cacaoEOX9095572.236557.3265
BVRB_6g129590beta_vulgarisKMT0948967.724953.4392citrullus_lanatusCla97C01G019410.172.112756.9014
BVRB_6g129590beta_vulgarisKMT0948971.693159.5238ficus_caricaFCD_00008654-RA:cds68.607656.962
BVRB_6g129590beta_vulgarisKMT0948971.16457.672prunus_dulcisVVA0981670.603757.2178
BVRB_6g129590beta_vulgarisKMT0948942.857134.3915oryza_longistaminataKN539381.1_FGP00663.03550.5837
BVRB_6g129590beta_vulgarisKMT0948958.730245.5026oryza_rufipogonORUFI07G16310.162.535248.4507
BVRB_6g129590beta_vulgarisKMT0948963.756649.2063lupinus_angustifoliusOIW1102172.155755.6886
BVRB_6g129590beta_vulgarisKMT0948970.899554.2328manihot_esculentaOAY5746760.496646.2754
BVRB_6g129590beta_vulgarisKMT0948964.550351.8519medicago_truncatulaAES9505373.49459.0361
BVRB_6g129590beta_vulgarisKMT0948960.317547.8836ananas_comosusAco009022.1.mrna161.12648.5255
BVRB_6g129590beta_vulgarisKMT0948968.783154.2328cucumis_meloMELO3C007871.2.173.863658.2386
BVRB_6g129590beta_vulgarisKMT0948958.730245.5026oryza_glaberrimaORGLA07G0129200.162.011248.0447
BVRB_6g129590beta_vulgarisKMT0948958.465646.2963oryza_brachyanthaOB07G21620.160.382547.8142
BVRB_6g129590beta_vulgarisKMT0948963.227549.4709vigna_unguiculataVigun02g126100.1.v1.268.285753.4286
BVRB_6g129590beta_vulgarisKMT0948962.96349.7355glycine_maxKRH7671568.985554.4928
BVRB_6g129590beta_vulgarisKMT0948963.492149.4709glycine_maxKRH2874167.605652.6761
BVRB_6g129590beta_vulgarisKMT0948962.698449.2063vigna_radiataVradi11g06070.168.299753.6023
BVRB_6g129590beta_vulgarisKMT0948959.259343.9153triticum_turgidumTRITD2Av1G093670.258.333343.2292
BVRB_6g129590beta_vulgarisKMT0948971.16457.9365prunus_persicaONH9697570.603757.4803
BVRB_6g129590beta_vulgarisKMT0948972.486858.2011quercus_lobataQL06p037339:mrna69.89856.1224
BVRB_6g129590beta_vulgarisKMT0948968.25455.8201ipomoea_trilobaitb03g07250.t170.299757.4932
BVRB_6g129590beta_vulgarisKMT0948967.989453.7037helianthus_annuusmRNA:HanXRQr2_Chr11g047166167.277553.1414
BVRB_6g129590beta_vulgarisKMT0948968.25455.5556cynara_cardunculusKVH9234667.894755.2632
BVRB_6g129590beta_vulgarisKMT0948970.634955.0265populus_trichocarpaPotri.018G018900.1.v4.169.17153.886
BVRB_6g129590beta_vulgarisKMT0948958.465644.9735oryza_indicaBGIOSGA025777-PA61.731847.486
BVRB_6g129590beta_vulgarisKMT0948958.730243.1217lolium_perennecds.KYUSt_chr2.1981962.535245.9155
BVRB_6g129590beta_vulgarisKMT0948963.492151.0582pisum_sativumPsat2g156680.1.cds73.619659.2025
BVRB_6g129590beta_vulgarisKMT0948966.931250.2645brassica_junceacds.BjuB06g43130S71.671453.8244
BVRB_6g129590beta_vulgarisKMT0948957.936545.2381leersia_perrieriLPERR07G13220.159.510946.4674
BVRB_6g129590beta_vulgarisKMT0948957.407445.7672setaria_viridisTKW3492260.277848.0556
BVRB_6g129590beta_vulgarisKMT0948949.470940.2116malus_domestica_goldenmRNA:MD15G022060073.91360.0791
BVRB_6g129590beta_vulgarisKMT0948964.550352.1164malus_domestica_goldenmRNA:MD02G011770064.550352.1164
BVRB_6g129590beta_vulgarisKMT0948963.227551.8519quercus_subercds-POE76620.169.679357.1429
BVRB_6g129590beta_vulgarisKMT0948962.698451.3228quercus_subercds-POF02953.169.096256.5598
BVRB_6g129590beta_vulgarisKMT0948958.465644.9735oryza_nivaraONIVA07G15440.161.731847.486
BVRB_6g129590beta_vulgarisKMT0948954.497445.5026citrus_clementinaESR3883473.309661.21
BVRB_6g129590beta_vulgarisKMT0948957.407445.7672setaria_italicaKQL2595060.277848.0556
BVRB_6g129590beta_vulgarisKMT0948952.38138.6243setaria_italicaKQL2594953.804339.6739
BVRB_6g129590beta_vulgarisKMT0948966.931250arabidopsis_hallerig07211.t167.287250.266
BVRB_6g129590beta_vulgarisKMT0948958.730244.4444avena_sativa_ot3098cds.AVESA.00001b.r3.2Cg0000738.163.428648
BVRB_6g129590beta_vulgarisKMT0948946.825434.6561asparagus_officinalisONK7645770.238151.9841
BVRB_6g129590beta_vulgarisKMT0948952.645542.0635eucalyptus_grandisKCW5309075.954260.687
BVRB_6g129590beta_vulgarisKMT0948966.931255.5556fraxinus_excelsiorFRAEX38873_v2_000344170.1.cds59.669849.5283
BVRB_6g129590beta_vulgarisKMT0948959.523844.1799aegilops_tauschiiAET2Gv20482200.460.975645.2575
BVRB_6g129590beta_vulgarisKMT0948958.730245.7672oryza_meridionalisOMERI07G12600.162.359648.5955
BVRB_6g129590beta_vulgarisKMT0948960.052948.4127amborella_trichopodaERN0125062.021950
BVRB_6g129590beta_vulgarisKMT0948958.730244.709sorghum_bicolorEER9727362.359647.4719
BVRB_6g129590beta_vulgarisKMT0948953.703739.1534sorghum_bicolorKXG3629155.922940.7714
BVRB_6g129590beta_vulgarisKMT0948972.486856.6138corchorus_capsularisOMO5695770.076754.7315
BVRB_6g129590beta_vulgarisKMT0948987.03778.836chenopodium_quinoaAUR62004116-RA:cds83.71575.827
BVRB_6g129590beta_vulgarisKMT0948985.978876.9841chenopodium_quinoaAUR62007631-RA:cds83.547674.8072
BVRB_6g129590beta_vulgarisKMT0948970.370459.2593juglans_regiacds.Jr08_18960_p168.556757.732
BVRB_6g129590beta_vulgarisKMT0948968.518556.8783coffea_canephoraCDP0195563.793152.9557
BVRB_6g129590beta_vulgarisKMT0948951.587339.1534digitaria_exilisDexi2A01G0027840.1:cds54.469341.3408
BVRB_6g129590beta_vulgarisKMT0948953.174639.6825digitaria_exilisDexi2B01G0026460.1:cds23.78717.7515
BVRB_6g129590beta_vulgarisKMT0948957.67244.4444digitaria_exilisDexi2A01G0027850.1:cds60.387846.5374
BVRB_6g129590beta_vulgarisKMT0948954.761942.8571cannabis_sativa_femalecds.evm.model.04.206067.207852.5974
BVRB_6g129590beta_vulgarisKMT0948957.936545.7672eragrostis_curvulaTVU3897661.516948.5955
BVRB_6g129590beta_vulgarisKMT0948965.343949.2063eutrema_salsugineumESQ3110966.576850.1348
BVRB_6g129590beta_vulgarisKMT0948958.201144.1799avena_sativa_sangAVESA.00010b.r2.2AG0198760.1.CDS63.037347.851
BVRB_6g129590beta_vulgarisKMT0948958.201144.1799avena_sativa_sangAVESA.00010b.r2.2DG0349990.1.CDS63.037347.851
BVRB_6g129590beta_vulgarisKMT0948933.597925.9259avena_sativa_sangAVESA.00010b.r2.UnG1431580.1.CDS49.416338.1323
BVRB_6g129590beta_vulgarisKMT0948958.730244.4444avena_sativa_sangAVESA.00010b.r2.2CG0276160.1.CDS63.428648
BVRB_6g129590beta_vulgarisKMT0948963.227551.3228trifolium_pratenseTp57577_TGAC_v2_mRNA244871.556958.0838
BVRB_6g129590beta_vulgarisKMT0948958.730245.5026oryza_barthiiOBART07G15770.162.011248.0447
BVRB_6g129590beta_vulgarisKMT0948970.634955.5556solanum_lycopersicumSolyc02g084730.3.169.17154.4041
BVRB_6g129590beta_vulgarisKMT0948959.523844.4444hordeum_vulgareHORVU.MOREX.r3.2HG0142100.164.102647.8632
BVRB_6g129590beta_vulgarisKMT0948962.698449.4709vigna_angularisKOM4519669.298254.6784
BVRB_6g129590beta_vulgarisKMT0948974.867759.7884gossypium_raimondiiKJB1771772.010257.5064
BVRB_6g129590beta_vulgarisKMT0948957.67245.5026panicum_halliiPUZ7219460.893948.0447
BVRB_6g129590beta_vulgarisKMT0948965.079449.4709cajanus_cajanC.cajan_12827.t70.285753.4286
BVRB_6g129590beta_vulgarisKMT0948966.931250brassica_rapa_ro18A07p023230.1_BraROA.170.670452.7933
BVRB_6g129590beta_vulgarisKMT0948970.899557.1429rosa_chinensisPRQ4748372.237258.221
BVRB_6g129590beta_vulgarisKMT0948963.492150.7937musa_acuminataMa08_p19540.162.827250.2618
BVRB_6g129590beta_vulgarisKMT0948969.841353.4392corymbia_citriodoracds-KAF8011085.168.217152.1964
BVRB_6g129590beta_vulgarisKMT0948960.58246.5608eragrostis_tefEt_5A_040599.CDS31.542724.2424
BVRB_6g129590beta_vulgarisKMT0948948.677232.8042oryza_punctataOPUNC01G16070.147.668432.1244
BVRB_6g129590beta_vulgarisKMT0948957.142944.4444oryza_punctataOPUNC07G14530.160.335246.9274
BVRB_6g129590beta_vulgarisKMT0948968.25453.4392daucus_carotaKZM9407566.839452.3316
BVRB_6g129590beta_vulgarisKMT0948972.751358.4656pistacia_veracds-EVM0004245.170.694156.8123
BVRB_6g129590beta_vulgarisKMT094895037.037echinochloa_crusgalliscaffold43.383.cds55.752241.2979
BVRB_6g129590beta_vulgarisKMT0948957.67245.7672echinochloa_crusgalliscaffold58.238.cds60.22147.7901
BVRB_6g129590beta_vulgarisKMT0948957.67245.7672echinochloa_crusgalliscaffold43.384.cds59.72647.3973
BVRB_6g129590beta_vulgarisKMT0948951.322838.3598echinochloa_crusgalliscaffold239.60.cds54.494440.7303
BVRB_6g129590beta_vulgarisKMT0948957.936546.0317echinochloa_crusgalliscaffold239.61.cds60.833348.3333
BVRB_6g129590beta_vulgarisKMT0948953.439238.0952echinochloa_crusgalliscaffold58.239.cds55.801139.779
BVRB_6g129590beta_vulgarisKMT0948958.730244.1799brachypodium_distachyonKQK1606761.495846.2604
BVRB_6g129590beta_vulgarisKMT0948966.402149.7355arabidopsis_lyratascaffold_803492.166.755350
BVRB_6g129590beta_vulgarisKMT0948958.994743.6508triticum_dicoccoidesTRIDC2BG033860.261.432545.4545
BVRB_6g129590beta_vulgarisKMT0948944.444433.5979triticum_dicoccoidesTRIDC2AG030140.265.882449.8039
BVRB_6g129590beta_vulgarisKMT0948957.936545.2381oryza_sativaOs07t0509600-0163.112449.2795
BVRB_6g129590beta_vulgarisKMT0948970.370456.3492solanum_tuberosumPGSC0003DMT40000930568.556754.8969
BVRB_6g129590beta_vulgarisKMT0948968.25451.5873arabidopsis_thalianaAT5G66360.267.894751.3158
BVRB_6g129590beta_vulgarisKMT0948958.465644.9735zea_maysZm00001eb105780_P00161.218847.0914
BVRB_6g129590beta_vulgarisKMT0948967.195855.5556olea_europaeaOE9A051909C165.97454.5455
BVRB_6g129590beta_vulgarisKMT0948965.343953.7037lactuca_sativacds-PLY95310.168.802256.546
BVRB_6g129590beta_vulgarisKMT0948959.259343.9153triticum_aestivumTraesCS2A02G225400.158.333343.2292
BVRB_6g129590beta_vulgarisKMT0948959.523844.1799triticum_aestivumTraesCS2D02G231300.163.920547.4432
BVRB_6g129590beta_vulgarisKMT0948958.994743.6508triticum_aestivumTraesCS2B02G249000.162.640446.3483
BVRB_6g129590beta_vulgarisKMT0948970.634956.6138nicotiana_attenuataOIT0635368.286454.7315
BVRB_6g129590beta_vulgarisKMT0948963.756649.7355phaseolus_vulgarisESW3060771.091455.4572
BVRB_6g129590beta_vulgarisKMT0948966.931249.7355brassica_napusCDY6538472.079853.5613
BVRB_6g129590beta_vulgarisKMT0948966.931249.4709brassica_napusCDY4521770.670452.2346
BVRB_6g129590beta_vulgarisKMT0948967.989451.8519arabis_alpinaKFK2830867.8151.715
BVRB_6g129590beta_vulgarisKMT0948968.25453.9683cucumis_sativusKGN4887973.295557.9545
BVRB_6g129590beta_vulgarisKMT0948972.222258.9947corylus_avellanaCav02g03700.t170.542657.6227
BVRB_6g129590beta_vulgarisKMT0948967.460355.0265capsicum_annuumPHT9128570.054957.1429
BVRB_6g129590beta_vulgarisKMT0948958.465645.2381oryza_glumipatulaOGLUM07G15490.156.234143.5115
BVRB_6g129590beta_vulgarisKMT0948958.201145.2381saccharum_spontaneumSspon.02G0006830-1A-mRNA-160.773547.2376
BVRB_6g129590beta_vulgarisKMT0948951.587336.2434saccharum_spontaneumSspon.02G0006830-2C-mRNA-159.63341.896
BVRB_6g129590beta_vulgarisKMT0948962.698450.5291nymphaea_colorataNC6G0041050.1:cds63.36951.0695
BVRB_6g129590beta_vulgarisKMT0948971.957759.2593vitis_viniferaVitvi04g01388_P00171.018358.4856
BVRB_6g129590beta_vulgarisKMT0948971.16457.4074prunus_aviumPav_sc0000099.1_g010.1.mk:mrna70.603756.9554
BVRB_6g129590beta_vulgarisKMT0948928.83620.3704camelina_sativaCsa11g104620.162.643744.2529
BVRB_6g129590beta_vulgarisKMT0948966.931250.5291camelina_sativaCsa02g076440.167.466750.9333
BVRB_6g129590beta_vulgarisKMT0948966.931249.7355camelina_sativaCsa18g042200.166.754649.6042
BVRB_6g129590beta_vulgarisKMT0948968.518556.3492sesamum_indicumSIN_1022237.t66.58154.7558
BVRB_6g129590beta_vulgarisKMT0948967.460354.4974kalanchoe_fedtschenkoiKaladp0096s0069.1.v1.166.929154.0682
BVRB_6g129590beta_vulgarisKMT0948956.349243.9153dioscorea_rotundataDRNTG_04269.164.545550.303
BVRB_6g129590beta_vulgarisKMT0948959.523844.1799secale_cerealeSECCE2Rv1G0090440.165.40748.5465
BVRB_6g129590beta_vulgarisKMT0948966.402154.7619papaver_somniferumRZC6648868.206556.25
BVRB_6g129590beta_vulgarisKMT0948970.105858.4656papaver_somniferumRZC4467165.110654.2998

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression