Description

Ensembl ID BVRB_5g122280 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 4205 bases Strand Minus strand
Position 5 : 52052847 - 52057051 RNA binding domain TRM13 , zf-TRM13_CCCH , zf-U11-48K
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KMT10013 TRM13 PF05206 2.1e-82 1
KMT10013 zf-TRM13_CCCH PF11722 4.4e-10 2
KMT10013 zf-U11-48K PF05253 1.6e-06 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KMT10013 1869 457aa KMT10013

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_5g122280

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
BVRB_5g122280beta_vulgarisKMT1001333.916818.5996chondrus_crispusCDF3935040.259722.0779
BVRB_5g122280beta_vulgarisKMT1001346.170730.8534chlamydomonas_reinhardtiiPNW7145225.029716.726
BVRB_5g122280beta_vulgarisKMT1001356.892839.8249marchantia_polymorphaPTQ3279253.169737.2188
BVRB_5g122280beta_vulgarisKMT1001373.085362.3632theobroma_cacaoEOX9539472.925862.2271
BVRB_5g122280beta_vulgarisKMT1001372.866560.1751citrullus_lanatusCla97C09G167040.172.54959.9129
BVRB_5g122280beta_vulgarisKMT1001367.833757.9869ficus_caricaFCD_00023269-RA:cds65.400855.9072
BVRB_5g122280beta_vulgarisKMT1001372.428963.895prunus_dulcisVVA2112471.336262.931
BVRB_5g122280beta_vulgarisKMT1001351.8639.8249oryza_longistaminataKN538869.1_FGP01357.246443.9614
BVRB_5g122280beta_vulgarisKMT1001364.332651.6411oryza_rufipogonORUFI03G41700.163.362150.8621
BVRB_5g122280beta_vulgarisKMT1001353.391742.2319lupinus_angustifoliusOIV9411167.5953.4626
BVRB_5g122280beta_vulgarisKMT1001373.304260.8315manihot_esculentaOAY4885975.620862.754
BVRB_5g122280beta_vulgarisKMT1001369.365455.5799medicago_truncatulaKEH4059669.21455.4585
BVRB_5g122280beta_vulgarisKMT1001361.706848.3589ananas_comosusAco000690.1.mrna163.513549.7748
BVRB_5g122280beta_vulgarisKMT1001363.238549.453cucumis_meloMELO3C023610.2.171.890556.2189
BVRB_5g122280beta_vulgarisKMT1001364.113851.4223oryza_glaberrimaORGLA03G0367700.163.146650.6466
BVRB_5g122280beta_vulgarisKMT1001363.457350.1094oryza_brachyanthaOB03G47040.162.549.3534
BVRB_5g122280beta_vulgarisKMT1001371.334855.7987vigna_unguiculataVigun02g019800.1.v1.271.648456.044
BVRB_5g122280beta_vulgarisKMT1001369.146654.7046glycine_maxKRH4964469.298254.8246
BVRB_5g122280beta_vulgarisKMT1001366.739651.4223vigna_radiataVradi11g12990.170.114954.023
BVRB_5g122280beta_vulgarisKMT1001350.984740.2626triticum_turgidumTRITD4Av1G222910.265.633851.831
BVRB_5g122280beta_vulgarisKMT1001363.676150.547triticum_turgidumTRITD0Uv1G051180.559.387847.1429
BVRB_5g122280beta_vulgarisKMT1001372.647763.895prunus_persicaONI1473071.551762.931
BVRB_5g122280beta_vulgarisKMT1001374.398262.3632quercus_lobataQL12p034319:mrna72.649660.8974
BVRB_5g122280beta_vulgarisKMT1001369.803159.9562ipomoea_trilobaitb07g21470.t173.502363.1336
BVRB_5g122280beta_vulgarisKMT1001367.614957.3304helianthus_annuusmRNA:HanXRQr2_Chr04g017634173.571462.381
BVRB_5g122280beta_vulgarisKMT1001368.490257.3304cynara_cardunculusKVI1250372.119860.3687
BVRB_5g122280beta_vulgarisKMT1001373.741860.8315populus_trichocarpaPotri.002G189800.1.v4.174.888961.7778
BVRB_5g122280beta_vulgarisKMT1001360.831548.5777oryza_indicaBGIOSGA013881-PA61.368749.0066
BVRB_5g122280beta_vulgarisKMT1001362.144450.3282lolium_perennecds.KYUSt_chr4.353562.693250.7726
BVRB_5g122280beta_vulgarisKMT1001343.763728.6652homo_sapiensENSP0000035916041.5827.2349
BVRB_5g122280beta_vulgarisKMT1001368.490254.9234pisum_sativumPsat6g046360.1.cds68.340654.8035
BVRB_5g122280beta_vulgarisKMT1001336.542720.3501caenorhabditis_elegansY49A3A.3.142.820523.8462
BVRB_5g122280beta_vulgarisKMT1001341.575527.3523drosophila_melanogasterFBpp008120943.083928.3447
BVRB_5g122280beta_vulgarisKMT1001343.982525.1641saccharomyces_cerevisiaeYOL125W42.226924.1597
BVRB_5g122280beta_vulgarisKMT1001362.363249.8906leersia_perrieriLPERR03G34020.161.688349.3507
BVRB_5g122280beta_vulgarisKMT1001364.551452.2976setaria_viridisTKV9034864.69352.4123
BVRB_5g122280beta_vulgarisKMT1001373.085363.0197malus_domestica_goldenmRNA:MD09G025040072.294462.3377
BVRB_5g122280beta_vulgarisKMT1001325.601819.9125malus_domestica_goldenmRNA:MD17G023970059.090945.9596
BVRB_5g122280beta_vulgarisKMT1001374.617162.8009quercus_subercds-POF16983.173.650161.987
BVRB_5g122280beta_vulgarisKMT1001364.332651.6411oryza_nivaraONIVA03G41810.163.362150.8621
BVRB_5g122280beta_vulgarisKMT1001372.647760.8315citrus_clementinaESR4776970.788959.2751
BVRB_5g122280beta_vulgarisKMT1001364.770252.5164setaria_italicaKQK8630964.912352.6316
BVRB_5g122280beta_vulgarisKMT1001370.021954.9234arabidopsis_hallerig09181.t170.021954.9234
BVRB_5g122280beta_vulgarisKMT1001362.144449.2341avena_sativa_ot3098cds.AVESA.00001b.r3.7Cg0000208.160.425547.8723
BVRB_5g122280beta_vulgarisKMT1001355.36142.2319asparagus_officinalisONK7879464.871849.4872
BVRB_5g122280beta_vulgarisKMT1001373.52360.3939eucalyptus_grandisKCW5816974.172260.9272
BVRB_5g122280beta_vulgarisKMT1001331.509826.9147eucalyptus_grandisKCW4541976.190565.0794
BVRB_5g122280beta_vulgarisKMT1001324.507720.5689eucalyptus_grandisKCW4542072.258160.6452
BVRB_5g122280beta_vulgarisKMT1001352.95437.6368selaginella_moellendorffiiEFJ0975159.605942.3645
BVRB_5g122280beta_vulgarisKMT1001326.47718.8184selaginella_moellendorffiiEFJ1165959.313742.1569
BVRB_5g122280beta_vulgarisKMT1001371.772458.8621fraxinus_excelsiorFRAEX38873_v2_000140230.1.cds70.995758.2251
BVRB_5g122280beta_vulgarisKMT1001364.113850.3282aegilops_tauschiiAET5Gv21142900.163.834450.1089
BVRB_5g122280beta_vulgarisKMT1001355.798744.8578oryza_meridionalisOMERI03G36730.162.807950.4926
BVRB_5g122280beta_vulgarisKMT1001368.927854.0481amborella_trichopodaERN0196663.508149.7984
BVRB_5g122280beta_vulgarisKMT1001363.676151.86sorghum_bicolorEER9058563.95652.0879
BVRB_5g122280beta_vulgarisKMT1001372.866561.0503corchorus_capsularisOMO6408320.342117.0434
BVRB_5g122280beta_vulgarisKMT1001325.601822.5383chenopodium_quinoaAUR62036055-RA:cds7566.0256
BVRB_5g122280beta_vulgarisKMT1001326.258222.5383chenopodium_quinoaAUR62029044-RA:cds7564.375
BVRB_5g122280beta_vulgarisKMT1001380.962873.3042chenopodium_quinoaAUR62011736-RA:cds85.648177.5463
BVRB_5g122280beta_vulgarisKMT1001381.838174.1794chenopodium_quinoaAUR62024570-RA:cds86.574178.4722
BVRB_5g122280beta_vulgarisKMT1001371.11661.9256juglans_regiacds.Jr10_10940_p172.383163.029
BVRB_5g122280beta_vulgarisKMT1001369.146654.0481brassica_oleraceaBo3g053040.170.693555.2573
BVRB_5g122280beta_vulgarisKMT1001370.678359.5186coffea_canephoraCDP1702169.762458.7473
BVRB_5g122280beta_vulgarisKMT1001351.8641.7943digitaria_exilisDexi9B01G0002180.1:cds61.718849.7396
BVRB_5g122280beta_vulgarisKMT1001351.422341.1379digitaria_exilisDexi9A01G0002430.1:cds61.197948.9583
BVRB_5g122280beta_vulgarisKMT1001371.553661.2691cannabis_sativa_femalecds.novel_model_1144_5bd9a17a_novel_model_1145_5bd9a17a69.574559.5745
BVRB_5g122280beta_vulgarisKMT1001341.794333.4792eragrostis_curvulaTVU4390744.941236
BVRB_5g122280beta_vulgarisKMT1001352.297642.2319eragrostis_curvulaTVU4430146.679737.6953
BVRB_5g122280beta_vulgarisKMT1001369.584254.7046eutrema_salsugineumESQ3783669.130454.3478
BVRB_5g122280beta_vulgarisKMT1001369.584254.7046eutrema_salsugineumESQ3783169.130454.3478
BVRB_5g122280beta_vulgarisKMT1001362.800950.1094avena_sativa_sangAVESA.00010b.r2.4AG0617740.1.CDS63.355450.5519
BVRB_5g122280beta_vulgarisKMT1001362.363250.1094avena_sativa_sangAVESA.00010b.r2.4DG0761160.1.CDS62.363250.1094
BVRB_5g122280beta_vulgarisKMT1001362.144449.2341avena_sativa_sangAVESA.00010b.r2.7CG0712980.1.CDS62.693249.6689
BVRB_5g122280beta_vulgarisKMT1001369.584255.5799trifolium_pratenseTp57577_TGAC_v2_mRNA3810164.50351.5213
BVRB_5g122280beta_vulgarisKMT1001364.113851.4223oryza_barthiiOBART03G39890.156.23845.1056
BVRB_5g122280beta_vulgarisKMT1001373.085359.081solanum_lycopersicumSolyc01g068050.3.174.887960.5381
BVRB_5g122280beta_vulgarisKMT1001363.238550.547hordeum_vulgareHORVU.MOREX.r3.5HG0529430.162.96350.3268
BVRB_5g122280beta_vulgarisKMT1001371.334856.0175vigna_angularisKOM4597971.334856.0175
BVRB_5g122280beta_vulgarisKMT1001372.428959.2998gossypium_raimondiiKJB0950572.270759.1703
BVRB_5g122280beta_vulgarisKMT1001363.89552.0788panicum_halliiPUZ3624559.349648.374
BVRB_5g122280beta_vulgarisKMT1001370.240754.7046cajanus_cajanC.cajan_41569.t70.240754.7046
BVRB_5g122280beta_vulgarisKMT1001369.365454.7046brassica_rapa_ro18A03p033140.1_BraROA.170.758955.8036
BVRB_5g122280beta_vulgarisKMT1001373.304261.2691rosa_chinensisPRQ4510771.125359.448
BVRB_5g122280beta_vulgarisKMT1001368.490253.3917musa_acuminataMa05_p00070.162.350648.6056
BVRB_5g122280beta_vulgarisKMT1001328.446422.1007corymbia_citriodoracds-KAF8038005.171.428655.4945
BVRB_5g122280beta_vulgarisKMT1001373.52360.8315corymbia_citriodoracds-KAF8014871.173.846261.0989
BVRB_5g122280beta_vulgarisKMT1001349.890640.2626eragrostis_tefEt_4A_034259.CDS59.5348.0418
BVRB_5g122280beta_vulgarisKMT1001346.827137.6368eragrostis_tefEt_4B_038398.CDS59.776548.0447
BVRB_5g122280beta_vulgarisKMT1001363.676151.6411oryza_punctataOPUNC03G37160.161.783450.1062
BVRB_5g122280beta_vulgarisKMT1001363.676151.6411oryza_punctataOPUNC03G37120.161.783450.1062
BVRB_5g122280beta_vulgarisKMT1001370.897260.8315daucus_carotaKZN0356071.365661.2335
BVRB_5g122280beta_vulgarisKMT1001371.772460.6127pistacia_veracds-EVM0024647.174.208162.6697
BVRB_5g122280beta_vulgarisKMT1001350.984741.7943echinochloa_crusgalliscaffold3.575.cds60.835549.8695
BVRB_5g122280beta_vulgarisKMT1001364.989151.86echinochloa_crusgalliscaffold176.327.cds65.131651.9737
BVRB_5g122280beta_vulgarisKMT1001355.36144.4201echinochloa_crusgalliscaffold65.204.cds64.213251.5228
BVRB_5g122280beta_vulgarisKMT1001365.207951.2035brachypodium_distachyonKQK1229865.207951.2035
BVRB_5g122280beta_vulgarisKMT1001369.365455.361arabidopsis_lyratafgenesh2_kg.6__3523__AT4G01880.169.21455.2402
BVRB_5g122280beta_vulgarisKMT1001363.457350.547triticum_dicoccoidesTRIDC5BG076380.264.444451.3333
BVRB_5g122280beta_vulgarisKMT1001360.393947.4836triticum_dicoccoidesTRIDC4AG053850.264.788750.939
BVRB_5g122280beta_vulgarisKMT1001332.385126.477oryza_sativaOs03t0833200-0159.248.4
BVRB_5g122280beta_vulgarisKMT1001373.304259.7374solanum_tuberosumPGSC0003DMT40001336375.112161.2108
BVRB_5g122280beta_vulgarisKMT1001368.70955.7987arabidopsis_thalianaAT4G01880.169.315756.2914
BVRB_5g122280beta_vulgarisKMT1001364.332651.6411zea_maysZm00001eb211340_P00264.900752.0971
BVRB_5g122280beta_vulgarisKMT1001359.518651.2035actinidia_chinensisPSS0606774.316963.9344
BVRB_5g122280beta_vulgarisKMT1001371.11657.7681olea_europaeaOE9A011037C270.498957.2668
BVRB_5g122280beta_vulgarisKMT1001367.396155.361lactuca_sativacds-PLY72987.174.576361.2591
BVRB_5g122280beta_vulgarisKMT1001363.676150.547triticum_aestivumTraesCS5B02G512400.259.387847.1429
BVRB_5g122280beta_vulgarisKMT1001362.800949.6718triticum_aestivumTraesCS4A02G360700.162.663849.5633
BVRB_5g122280beta_vulgarisKMT1001364.113850.3282triticum_aestivumTraesCS5D02G512600.163.695750
BVRB_5g122280beta_vulgarisKMT1001371.772458.4245nicotiana_attenuataOIT0845375.57661.5207
BVRB_5g122280beta_vulgarisKMT1001370.459555.1422phaseolus_vulgarisESW2524370.925155.5066
BVRB_5g122280beta_vulgarisKMT1001369.584254.7046brassica_napusCDX9183671.140955.9284
BVRB_5g122280beta_vulgarisKMT1001369.584254.7046brassica_napusCDX7439770.982155.8036
BVRB_5g122280beta_vulgarisKMT1001369.365454.267arabis_alpinaKFK3073773.720957.6744
BVRB_5g122280beta_vulgarisKMT1001373.741859.7374cucumis_sativusKGN4506273.580859.607
BVRB_5g122280beta_vulgarisKMT1001337.636830.1969corylus_avellanaCav02g16400.t167.984254.5455
BVRB_5g122280beta_vulgarisKMT1001365.645556.0175corylus_avellanaCav02g16380.t158.593850
BVRB_5g122280beta_vulgarisKMT1001372.210158.8621capsicum_annuumPHT9453773.333359.7778
BVRB_5g122280beta_vulgarisKMT1001364.551451.86oryza_glumipatulaOGLUM03G39800.163.577651.0776
BVRB_5g122280beta_vulgarisKMT1001344.63935.2298saccharum_spontaneumSspon.01G0031730-1A-mRNA-158.119745.8689
BVRB_5g122280beta_vulgarisKMT1001320.787716.4114saccharum_spontaneumSspon.01G0031730-3D-mRNA-156.886244.9102
BVRB_5g122280beta_vulgarisKMT1001367.833753.6105nymphaea_colorataNC10G0266000.1:cds56.880744.9541
BVRB_5g122280beta_vulgarisKMT1001375.054764.9891vitis_viniferaVitvi07g00477_P00174.242464.2857
BVRB_5g122280beta_vulgarisKMT1001339.824924.5077ostreococcus_lucimarinusABO9451343.645126.8585
BVRB_5g122280beta_vulgarisKMT1001369.365454.9234camelina_sativaCsa13g055410.170.444455.7778
BVRB_5g122280beta_vulgarisKMT1001369.584254.4858camelina_sativaCsa02g005000.170.982155.5804
BVRB_5g122280beta_vulgarisKMT1001356.236344.2013camelina_sativaCsa08g052660.173.219457.5499
BVRB_5g122280beta_vulgarisKMT1001372.210157.5492sesamum_indicumSIN_1012654.t67.484753.7832
BVRB_5g122280beta_vulgarisKMT1001351.422334.5733chara_brauniiGBG8963715.878410.6757
BVRB_5g122280beta_vulgarisKMT1001371.772457.3304kalanchoe_fedtschenkoiKaladp0082s0104.1.v1.173.873959.009
BVRB_5g122280beta_vulgarisKMT1001367.833751.86dioscorea_rotundataDRNTG_08420.170.61553.9863
BVRB_5g122280beta_vulgarisKMT1001359.299843.326physcomitrium_patensPp3c21_16200V3.142.744531.2303
BVRB_5g122280beta_vulgarisKMT1001363.238550.547secale_cerealeSECCE7Rv1G0462300.163.377250.6579
BVRB_5g122280beta_vulgarisKMT1001360.393947.9212papaver_somniferumRZC5298831.907525.3179
BVRB_5g122280beta_vulgarisKMT1001363.238551.6411papaver_somniferumRZC5606222.525318.3944
BVRB_5g122280beta_vulgarisKMT1001351.641142.4508papaver_somniferumRZC8453132.641826.8326

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression