RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	BVRB_5g121130	Gene ID		Accession	-
Symbol		Alias	-	Full Name	hypothetical protein
Status	Confidence	Length	5595 bases	Strand	Plus strand
Position	5 : 50861136 - 50866730	RNA binding domain	Slu7
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
KMT09894	Slu7	PF11708	1.2e-95	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	KMT09894	2074	537aa	KMT09894

Gene Model

Click here to download BVRB_5g121130's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download BVRB_5g121130's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
BVRB_5g121130	beta_vulgaris	KMS93442	58.9552	41.0448	beta_vulgaris	KMT09894	14.7114	10.2421

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
BVRB_5g121130	beta_vulgaris	KMT09894	57.7281	43.0168	chondrus_crispus	CDF35941	56.2613	41.9238
BVRB_5g121130	beta_vulgaris	KMT09894	68.3426	51.9553	chlamydomonas_reinhardtii	PNW85593	66.7273	50.7273
BVRB_5g121130	beta_vulgaris	KMT09894	87.8957	75.9777	marchantia_polymorpha	PTQ44562	87.4074	75.5556
BVRB_5g121130	beta_vulgaris	KMT09894	89.7579	79.702	oryza_longistaminata	KN538715.1_FGP108	87.6364	77.8182
BVRB_5g121130	beta_vulgaris	KMT09894	89.7579	79.5158	oryza_rufipogon	ORUFI08G01940.1	89.9254	79.6642
BVRB_5g121130	beta_vulgaris	KMT09894	91.8063	80.8194	ananas_comosus	Aco008959.1.mrna1	91.9776	80.9701
BVRB_5g121130	beta_vulgaris	KMT09894	89.7579	79.702	oryza_glaberrima	ORGLA08G0010900.1	89.9254	79.8507
BVRB_5g121130	beta_vulgaris	KMT09894	89.5717	79.1434	oryza_brachyantha	OB08G11950.1	89.9065	79.4393
BVRB_5g121130	beta_vulgaris	KMT09894	88.8268	78.2123	triticum_urartu	TuG1812G0700003405.01.T01	89.1589	78.5047
BVRB_5g121130	beta_vulgaris	KMT09894	88.6406	78.2123	triticum_turgidum	TRITD7Bv1G120420.2	88.972	78.5047
BVRB_5g121130	beta_vulgaris	KMT09894	88.8268	78.2123	triticum_turgidum	TRITD7Av1G162880.1	89.1589	78.5047
BVRB_5g121130	beta_vulgaris	KMT09894	89.7579	79.5158	oryza_indica	BGIOSGA027917-PA	89.9254	79.6642
BVRB_5g121130	beta_vulgaris	KMT09894	79.3296	69.2737	lolium_perenne	cds.KYUSt_chr7.19136	48.9093	42.7095
BVRB_5g121130	beta_vulgaris	KMT09894	88.8268	78.2123	lolium_perenne	cds.KYUSt_chr7.19114	89.1589	78.5047
BVRB_5g121130	beta_vulgaris	KMT09894	64.2458	48.7896	homo_sapiens	ENSP00000297151	58.8737	44.7099
BVRB_5g121130	beta_vulgaris	KMT09894	57.9143	40.5959	caenorhabditis_elegans	K07C5.6.1	48.068	33.694
BVRB_5g121130	beta_vulgaris	KMT09894	91.0615	80.8194	brassica_juncea	cds.BjuA08g31020S	91.0615	80.8194
BVRB_5g121130	beta_vulgaris	KMT09894	90.689	80.0745	brassica_juncea	cds.BjuB03g58700S	90.689	80.0745
BVRB_5g121130	beta_vulgaris	KMT09894	30.1676	24.0223	brassica_juncea	cds.BjuA01g16600S	81.8182	65.1515
BVRB_5g121130	beta_vulgaris	KMT09894	58.6592	42.0857	drosophila_melanogaster	FBpp0084787	54.878	39.3728
BVRB_5g121130	beta_vulgaris	KMT09894	90.1304	80.4469	leersia_perrieri	LPERR08G01890.1	90.2985	80.597
BVRB_5g121130	beta_vulgaris	KMT09894	90.1304	78.3985	setaria_viridis	TKW09198	90.4673	78.6916
BVRB_5g121130	beta_vulgaris	KMT09894	89.7579	79.5158	setaria_viridis	TKW22792	90.2622	79.9625
BVRB_5g121130	beta_vulgaris	KMT09894	89.7579	79.5158	oryza_nivara	ONIVA08G01610.1	89.9254	79.6642
BVRB_5g121130	beta_vulgaris	KMT09894	21.7877	16.7598	citrus_clementina	ESR66619	72.6708	55.9006
BVRB_5g121130	beta_vulgaris	KMT09894	90.1304	78.3985	setaria_italica	KQL00969	80.5324	70.0499
BVRB_5g121130	beta_vulgaris	KMT09894	89.7579	79.5158	setaria_italica	KQL11716	90.2622	79.9625
BVRB_5g121130	beta_vulgaris	KMT09894	62.5698	50.4655	arabidopsis_halleri	g21744.t1	66.2722	53.4517
BVRB_5g121130	beta_vulgaris	KMT09894	89.7579	79.5158	arabidopsis_halleri	g03022.t1	89.9254	79.6642
BVRB_5g121130	beta_vulgaris	KMT09894	91.8063	80.4469	arabidopsis_halleri	g24363.t1	91.9776	80.597
BVRB_5g121130	beta_vulgaris	KMT09894	89.013	78.0261	avena_sativa_ot3098	cds.AVESA.00001b.r3.7Dg0001647.2	84.1549	73.7676
BVRB_5g121130	beta_vulgaris	KMT09894	89.013	78.0261	avena_sativa_ot3098	cds.AVESA.00001b.r3.7Ag0002643.1	83.4206	73.1239
BVRB_5g121130	beta_vulgaris	KMT09894	89.013	78.0261	avena_sativa_ot3098	cds.AVESA.00001b.r3.4Cg0001975.1	83.1304	72.8696
BVRB_5g121130	beta_vulgaris	KMT09894	82.8678	72.9981	asparagus_officinalis	ONK57375	92.3237	81.3278
BVRB_5g121130	beta_vulgaris	KMT09894	91.6201	81.9367	asparagus_officinalis	ONK70715	91.6201	81.9367
BVRB_5g121130	beta_vulgaris	KMT09894	86.5922	74.4879	selaginella_moellendorffii	EFJ31530	86.2709	74.2115
BVRB_5g121130	beta_vulgaris	KMT09894	86.5922	74.6741	selaginella_moellendorffii	EFJ38615	86.2709	74.397
BVRB_5g121130	beta_vulgaris	KMT09894	88.6406	78.2123	aegilops_tauschii	AET7Gv20777100.6	88.972	78.5047
BVRB_5g121130	beta_vulgaris	KMT09894	89.7579	79.702	oryza_meridionalis	OMERI08G01830.1	89.9254	79.8507
BVRB_5g121130	beta_vulgaris	KMT09894	50.838	39.1061	amborella_trichopoda	ERN18743	69.4657	53.4351
BVRB_5g121130	beta_vulgaris	KMT09894	90.1304	79.1434	amborella_trichopoda	ERN18865	90.4673	79.4393
BVRB_5g121130	beta_vulgaris	KMT09894	89.1993	78.2123	sorghum_bicolor	EES13297	89.5327	78.5047
BVRB_5g121130	beta_vulgaris	KMT09894	85.4749	81.0056	chenopodium_quinoa	AUR62011871-RA:cds	96.4286	91.3866
BVRB_5g121130	beta_vulgaris	KMT09894	88.6406	84.1713	chenopodium_quinoa	AUR62024715-RA:cds	97.7413	92.8131
BVRB_5g121130	beta_vulgaris	KMT09894	65.3631	56.9832	chenopodium_quinoa	AUR62027753-RA:cds	86.4532	75.3695
BVRB_5g121130	beta_vulgaris	KMT09894	84.73	73.5568	brassica_oleracea	Bo3g129960.1	86.9981	75.5258
BVRB_5g121130	beta_vulgaris	KMT09894	88.8268	77.095	brassica_oleracea	Bo8g002640.1	55.9859	48.5915
BVRB_5g121130	beta_vulgaris	KMT09894	90.8752	80.4469	brassica_oleracea	Bo5g004190.1	91.215	80.7477
BVRB_5g121130	beta_vulgaris	KMT09894	89.013	78.771	digitaria_exilis	Dexi6A01G0002430.1:cds	89.5131	79.2135
BVRB_5g121130	beta_vulgaris	KMT09894	89.3855	77.6536	digitaria_exilis	Dexi4B01G0015390.1:cds	86.9565	75.5435
BVRB_5g121130	beta_vulgaris	KMT09894	89.3855	77.8399	digitaria_exilis	Dexi4A01G0015470.1:cds	89.7196	78.1308
BVRB_5g121130	beta_vulgaris	KMT09894	88.2682	77.6536	digitaria_exilis	Dexi6B01G0002350.1:cds	87.4539	76.9373
BVRB_5g121130	beta_vulgaris	KMT09894	89.5717	78.2123	eragrostis_curvula	TVU07900	89.9065	78.5047
BVRB_5g121130	beta_vulgaris	KMT09894	89.7579	78.2123	eragrostis_curvula	TVU43542	89.4249	77.9221
BVRB_5g121130	beta_vulgaris	KMT09894	74.1155	65.5493	eutrema_salsugineum	ESQ56185	86.1472	76.1905
BVRB_5g121130	beta_vulgaris	KMT09894	91.6201	81.378	eutrema_salsugineum	ESQ36544	91.9626	81.6822
BVRB_5g121130	beta_vulgaris	KMT09894	91.8063	81.1918	eutrema_salsugineum	ESQ56219	92.1495	81.4953
BVRB_5g121130	beta_vulgaris	KMT09894	89.013	78.0261	avena_sativa_sang	AVESA.00010b.r2.7AG1242230.1.CDS	89.3458	78.3178
BVRB_5g121130	beta_vulgaris	KMT09894	89.013	78.0261	avena_sativa_sang	AVESA.00010b.r2.7DG1366480.1.CDS	89.3458	78.3178
BVRB_5g121130	beta_vulgaris	KMT09894	89.013	78.0261	avena_sativa_sang	AVESA.00010b.r2.4CG1292560.1.CDS	89.3458	78.3178
BVRB_5g121130	beta_vulgaris	KMT09894	89.7579	79.5158	oryza_barthii	OBART08G01730.1	89.9254	79.6642
BVRB_5g121130	beta_vulgaris	KMT09894	88.6406	78.2123	hordeum_vulgare	HORVU.MOREX.r3.7HG0703410.1	88.972	78.5047
BVRB_5g121130	beta_vulgaris	KMT09894	89.9441	78.5847	panicum_hallii	PUZ49971	90.2804	78.8785
BVRB_5g121130	beta_vulgaris	KMT09894	89.9441	79.5158	panicum_hallii	PUZ60273	90.2804	79.8131
BVRB_5g121130	beta_vulgaris	KMT09894	31.8436	25.8845	brassica_rapa_ro18	A01p036650.1_BraROA.1	81.4286	66.1905
BVRB_5g121130	beta_vulgaris	KMT09894	90.3166	79.702	brassica_rapa_ro18	A08p045910.1_BraROA.1	89.8148	79.2593
BVRB_5g121130	beta_vulgaris	KMT09894	91.0615	80.8194	brassica_rapa_ro18	A10p002630.1_BraROA.1	91.4019	81.1215
BVRB_5g121130	beta_vulgaris	KMT09894	91.6201	79.8883	musa_acuminata	Ma04_p28530.1	91.791	80.0373
BVRB_5g121130	beta_vulgaris	KMT09894	91.0615	78.771	musa_acuminata	Ma05_p03670.1	91.2313	78.9179
BVRB_5g121130	beta_vulgaris	KMT09894	89.5717	78.0261	eragrostis_tef	Et_8A_057236.CDS	89.9065	78.3178
BVRB_5g121130	beta_vulgaris	KMT09894	89.7579	78.3985	eragrostis_tef	Et_8B_059597.CDS	90.0935	78.6916
BVRB_5g121130	beta_vulgaris	KMT09894	89.7579	78.2123	eragrostis_tef	Et_2B_021304.CDS	86.8468	75.6757
BVRB_5g121130	beta_vulgaris	KMT09894	88.6406	77.4674	eragrostis_tef	Et_2A_017312.CDS	85.4578	74.6858
BVRB_5g121130	beta_vulgaris	KMT09894	89.7579	79.702	oryza_punctata	OPUNC08G01690.1	89.9254	79.8507
BVRB_5g121130	beta_vulgaris	KMT09894	85.8473	75.0466	echinochloa_crusgalli	scaffold116.2.cds	20.1662	17.629
BVRB_5g121130	beta_vulgaris	KMT09894	89.9441	78.5847	echinochloa_crusgalli	scaffold215.23.cds	90.2804	78.8785
BVRB_5g121130	beta_vulgaris	KMT09894	89.9441	78.771	echinochloa_crusgalli	scaffold63.553.cds	90.2804	79.0654
BVRB_5g121130	beta_vulgaris	KMT09894	79.1434	67.784	echinochloa_crusgalli	scaffold93.86.cds	54.2784	46.4879
BVRB_5g121130	beta_vulgaris	KMT09894	81.378	71.8808	echinochloa_crusgalli	scaffold25.68.cds	88.641	78.2961
BVRB_5g121130	beta_vulgaris	KMT09894	89.9441	78.771	echinochloa_crusgalli	scaffold256.32.cds	82.4232	72.1843
BVRB_5g121130	beta_vulgaris	KMT09894	38.9199	28.8641	ciona_savignyi	ENSCSAVP00000008277	50.4831	37.4396
BVRB_5g121130	beta_vulgaris	KMT09894	89.1993	79.3296	brachypodium_distachyon	PNT66572	89.5327	79.6262
BVRB_5g121130	beta_vulgaris	KMT09894	58.6592	49.9069	arabidopsis_lyrata	scaffold_501475.1	85.5978	72.8261
BVRB_5g121130	beta_vulgaris	KMT09894	91.4339	80.2607	arabidopsis_lyrata	fgenesh2_kg.2__802__AT4G37120.1	91.6045	80.4104
BVRB_5g121130	beta_vulgaris	KMT09894	89.5717	79.1434	arabidopsis_lyrata	fgenesh2_kg.7__361__AT4G37120.1	89.7388	79.291
BVRB_5g121130	beta_vulgaris	KMT09894	83.6127	72.6257	triticum_dicoccoides	TRIDC7AG043560.3	82.6888	71.8232
BVRB_5g121130	beta_vulgaris	KMT09894	88.6406	78.2123	triticum_dicoccoides	TRIDC7BG034800.3	88.972	78.5047
BVRB_5g121130	beta_vulgaris	KMT09894	89.7579	79.5158	oryza_sativa	Os08t0127700-01	89.9254	79.6642
BVRB_5g121130	beta_vulgaris	KMT09894	57.9143	40.5959	galdieria_sulphuraria	EME32812	62.7016	43.9516
BVRB_5g121130	beta_vulgaris	KMT09894	89.3855	78.0261	arabidopsis_thaliana	AT4G37120.1	89.5522	78.1716
BVRB_5g121130	beta_vulgaris	KMT09894	58.473	49.162	arabidopsis_thaliana	AT3G45950.1	81.5584	68.5714
BVRB_5g121130	beta_vulgaris	KMT09894	91.8063	80.0745	arabidopsis_thaliana	AT1G65660.1	92.1495	80.3738
BVRB_5g121130	beta_vulgaris	KMT09894	89.5717	78.9572	zea_mays	Zm00001eb173350_P001	90.0749	79.4007
BVRB_5g121130	beta_vulgaris	KMT09894	89.9441	79.3296	zea_mays	Zm00001eb261550_P001	90.2804	79.6262
BVRB_5g121130	beta_vulgaris	KMT09894	88.8268	78.2123	triticum_aestivum	TraesCS7A02G312400.1	89.1589	78.5047
BVRB_5g121130	beta_vulgaris	KMT09894	88.6406	78.2123	triticum_aestivum	TraesCS7D02G308800.1	88.972	78.5047
BVRB_5g121130	beta_vulgaris	KMT09894	88.6406	78.2123	triticum_aestivum	TraesCS7B02G212100.1	88.972	78.5047
BVRB_5g121130	beta_vulgaris	KMT09894	91.0615	80.8194	brassica_napus	CDY15479	91.0615	80.8194
BVRB_5g121130	beta_vulgaris	KMT09894	30.7263	24.0223	brassica_napus	CDY48398	81.6832	63.8614
BVRB_5g121130	beta_vulgaris	KMT09894	90.1304	79.702	brassica_napus	CDX86665	87.2072	77.1171
BVRB_5g121130	beta_vulgaris	KMT09894	90.5028	80.0745	brassica_napus	CDY18194	90.8411	80.3738
BVRB_5g121130	beta_vulgaris	KMT09894	90.8752	80.8194	brassica_napus	CDX89857	91.215	81.1215
BVRB_5g121130	beta_vulgaris	KMT09894	84.5438	73.5568	brassica_napus	CDX86021	86.8069	75.5258
BVRB_5g121130	beta_vulgaris	KMT09894	91.8063	81.378	arabis_alpina	KFK42733	92.1495	81.6822
BVRB_5g121130	beta_vulgaris	KMT09894	60.7076	49.9069	arabis_alpina	KFK28731	82.5316	67.8481
BVRB_5g121130	beta_vulgaris	KMT09894	89.7579	79.5158	oryza_glumipatula	OGLUM08G01820.1	89.9254	79.6642
BVRB_5g121130	beta_vulgaris	KMT09894	89.1993	77.8399	saccharum_spontaneum	Sspon.06G0012230-1A-mRNA-1:cds	89.7004	78.2772
BVRB_5g121130	beta_vulgaris	KMT09894	89.1993	77.8399	saccharum_spontaneum	Sspon.06G0012230-2B-mRNA-1:cds	89.5327	78.1308
BVRB_5g121130	beta_vulgaris	KMT09894	81.5642	70.9497	saccharum_spontaneum	Sspon.06G0012230-3C-mRNA-1:cds	89.3878	77.7551
BVRB_5g121130	beta_vulgaris	KMT09894	63.3147	55.6797	saccharum_spontaneum	Sspon.06G0012230-1P-mRNA-1:cds	91.1528	80.1609
BVRB_5g121130	beta_vulgaris	KMT09894	91.6201	81.5642	nymphaea_colorata	NC12G0097010.1:cds	90.6077	80.663
BVRB_5g121130	beta_vulgaris	KMT09894	67.5978	51.9553	ostreococcus_lucimarinus	ABP00819	64.9374	49.9106
BVRB_5g121130	beta_vulgaris	KMT09894	22.905	18.4358	camelina_sativa	Csa10g004170.1	83.6735	67.3469
BVRB_5g121130	beta_vulgaris	KMT09894	86.5922	75.9777	camelina_sativa	Csa12g004420.1	87.242	76.5478
BVRB_5g121130	beta_vulgaris	KMT09894	91.8063	80.0745	camelina_sativa	Csa07g029530.1	91.9776	80.2239
BVRB_5g121130	beta_vulgaris	KMT09894	57.7281	49.5345	camelina_sativa	Csa04g002670.1.cds1	82.0106	70.3704
BVRB_5g121130	beta_vulgaris	KMT09894	91.9926	80.4469	camelina_sativa	Csa05g056980.1	92.1642	80.597
BVRB_5g121130	beta_vulgaris	KMT09894	83.054	73.1844	camelina_sativa	Csa10g004160.1	87.1094	76.7578
BVRB_5g121130	beta_vulgaris	KMT09894	91.9926	80.2607	camelina_sativa	Csa16g023000.1	92.1642	80.4104
BVRB_5g121130	beta_vulgaris	KMT09894	88.0819	77.6536	camelina_sativa	Csa11g004680.1	87.9182	77.5093
BVRB_5g121130	beta_vulgaris	KMT09894	43.7616	37.9888	camelina_sativa	Csa06g019690.1.cds1	84.2294	73.1183
BVRB_5g121130	beta_vulgaris	KMT09894	79.5158	64.432	chara_braunii	GBG91669	27.2669	22.0945
BVRB_5g121130	beta_vulgaris	KMT09894	84.73	70.3911	chara_braunii	GBG92225	81.8345	67.9856
BVRB_5g121130	beta_vulgaris	KMT09894	78.0261	68.1564	kalanchoe_fedtschenkoi	Kaladp0864s0003.1.v1.1	88.5835	77.3784
BVRB_5g121130	beta_vulgaris	KMT09894	39.6648	33.7058	dioscorea_rotundata	DRNTG_29640.1	86.9388	73.8775
BVRB_5g121130	beta_vulgaris	KMT09894	89.1993	75.7914	physcomitrium_patens	Pp3c19_14100V3.1	88.7037	75.3704
BVRB_5g121130	beta_vulgaris	KMT09894	88.8268	78.2123	secale_cereale	SECCE7Rv1G0492420.1	89.1589	78.5047
BVRB_5g121130	beta_vulgaris	KMT09894	86.9646	77.4674	papaver_somniferum	RZC52190	84.755	75.4991
BVRB_5g121130	beta_vulgaris	KMT09894	86.5922	76.3501	papaver_somniferum	RZC49351	86.4312	76.2082
BVRB_5g121130	beta_vulgaris	KMT09894	86.9646	77.095	papaver_somniferum	RZC80249	82.6549	73.2743
BVRB_5g121130	beta_vulgaris	KMT09894	67.4115	57.3557	papaver_somniferum	RZC81075	83.4101	70.9677
BVRB_5g121130	beta_vulgaris	KMT09894	41.8994	35.3818	papaver_somniferum	RZC84579	80.6452	68.1004
BVRB_5g121130	beta_vulgaris	KMT09894	84.5438	74.8603	papaver_somniferum	RZC49386	84.8598	75.1402
BVRB_5g121130	beta_vulgaris	KMT09894	26.8156	24.2086	papaver_somniferum	RZC49352	87.8049	79.2683

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression